Detailed information of ANN35089-RA in Montipora grisea

Genomic Location: Scaffold_2300__1_contigs__length_43889:1312...2974
NR annotation: WP_039537825.1, carbamoyl-phosphate synthase large subunit [Ruegeria sp. ANG-R]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8UDE9Carbamoyl phosphate synthase large chain OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=carB PE=3 SV=2
Q92PZ4Carbamoyl phosphate synthase large chain OS=Rhizobium meliloti (strain 1021) OX=266834 GN=carB PE=3 SV=1
Q98I87Carbamoyl phosphate synthase large chain OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=carB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001107 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02787
all species →
CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF02786
all species →
CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005480
all species →
DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR011761
all species →
DomainATP-grasp foldInterproscan
IPR016185
all species →
Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR005483
all species →
DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR005479
all species →
DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR036897
all species →
Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405
all species →
CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004088
all species →
Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006541
all species →
Biological Processglutamine metabolic processInterproscan
GO:0006807
all species →
Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35089-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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