Genomic Location: Scaffold_76__1_contigs__length_70814:7498...11027
NR annotation: GEW75312.1, DNA gyrase subunit B, chloroplastic/mitochondrial [Tanacetum cinerariifolium]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN35090-RA |
| Transcript |
| ANN35090-RA |
| Protein |
| ANN35090-RA |
| UniProt accession | Description |
|---|---|
| Q9I7C2 | DNA gyrase subunit B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=gyrB PE=1 SV=1 |
| P13364 | DNA gyrase subunit B OS=Pseudomonas putida OX=303 GN=gyrB PE=3 SV=2 |
| Q9KVX3 | DNA gyrase subunit B OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=gyrB PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010595 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00986 all species → | DNA_gyraseB_C | DNA gyrase B subunit, carboxyl terminus | Family | Interproscan |
| PF18053 all species → | GyrB_insert | DNA gyrase B subunit insert domain | Domain | Interproscan |
| PF21249 all species → | GyrB_hook | GyrB, hook | Domain | Interproscan |
| PF02518 all species → | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Domain | Interproscan |
| PF02463 all species → | SMC_N | RecF/RecN/SMC N terminal domain | Domain | Interproscan |
| PF00204 all species → | DNA_gyraseB | DNA gyrase B | Domain | Interproscan |
| PF01751 all species → | Toprim | Toprim domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018078 all species → | Conserved_site | DNA-binding, RecF, conserved site | Interproscan |
| IPR042174 all species → | Homologous_superfamily | DNA-binding RecF, domain 2 | Interproscan |
| IPR002288 all species → | Domain | DNA gyrase B subunit, C-terminal | Interproscan |
| IPR041423 all species → | Domain | DNA gyrase subunit B insert domain | Interproscan |
| IPR000565 all species → | Family | DNA topoisomerase, type IIA, subunit B | Interproscan |
| IPR003594 all species → | Domain | Histidine kinase/HSP90-like ATPase | Interproscan |
| IPR013759 all species → | Homologous_superfamily | DNA topoisomerase, type IIA, subunit B, C-terminal | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR006171 all species → | Domain | TOPRIM domain | Interproscan |
| IPR049353 all species → | Domain | DNA gyrase subunit B, hook | Interproscan |
| IPR020568 all species → | Homologous_superfamily | Ribosomal protein uS5 domain 2-type superfamily | Interproscan |
| IPR036890 all species → | Homologous_superfamily | Histidine kinase/HSP90-like ATPase superfamily | Interproscan |
| IPR001238 all species → | Family | DNA-binding, RecF | Interproscan |
| IPR011557 all species → | Family | DNA gyrase, subunit B | Interproscan |
| IPR013760 all species → | Homologous_superfamily | DNA topoisomerase, type IIA-like domain superfamily | Interproscan |
| IPR001241 all species → | Family | DNA topoisomerase, type IIA | Interproscan |
| IPR003395 all species → | Domain | RecF/RecN/SMC, N-terminal | Interproscan |
| IPR013506 all species → | Domain | DNA topoisomerase, type IIA, subunit B, domain 2 | Interproscan |
| IPR014721 all species → | Homologous_superfamily | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Interproscan |
| IPR034160 all species → | Domain | DNA gyrase subunit B, TOPRIM domain | Interproscan |
| IPR018522 all species → | Conserved_site | DNA topoisomerase, type IIA, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45866 all species → | DNA GYRASE/TOPOISOMERASE SUBUNIT B | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003697 all species → | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003918 all species → | Molecular Function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | Interproscan |
| GO:0006265 all species → | Biological Process | DNA topological change | Interproscan |
| GO:0005694 all species → | Cellular Component | chromosome | Interproscan |
ANN35090-RA.
