Gene detail

Detailed information of ANN35092-RA in Montipora grisea

Genomic Location: Scaffold_1842__1_contigs__length_48958:8772...15451
NR annotation: XP_011407980.2, PREDICTED: TNF receptor-associated factor 4-like [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN35092-RA

ATGGAAAAGGCACGGTCCAACGCTCCTCCGATCTCGAGACCAGTCGTACATAATAGTGCAAAGGATCAAAACTGCGGTGGATACGAATGTGAATTCGTGCAACGCCCACCACATTACTTCCAAACCGAGTGTTCTATCTGTCTACAGATCCTTCGCTCTCCTCACATCACGAGCTGCTGCGGACAGTACTTTTGTCTCGAATGTATTGGTCGTATTCAAAAGGCGGGGAAAAGCTGTCCTCTCTGTAATGTGGAAGGGTTTAGCCTAACGTACAATCGTGCTCACGATGGGTCCCTTAAACAGCTTGAGGTCTACTGCACCCATCATAAAATGGGGTGTGAGTGGAAGGGAAACCTGGAGATGCTTGACAATCACCTGAATGCCAATCCTAGGCTAGATAAGCAGCTTGAAGGTTGTGGTTTCACTGAGGTTGAGTGCTTCAACACTGGCTGTGTAAAGCACTTCCAGCGTCGTCACATTGCCAAACACCAGTGTGAGGATTGCCCACTACAACTGTACAGCTGTGAGCACTGTCATGAGTATGAGTCGACCTTCCATGATGTAATGACCAACCACTGGCCAGTGTGCAAGTATTATCCAGTCTCCTGCCCCCACGAGTGCATGTCAAACACAATGGAACGCCAAGAACTTGAGAAGCACCTGAAAGAAGCATGTCCTCTCCAAGAGGTTGATTGTGAGTTCAGGTATGCAGGATGTGAGACCAAGCTACCTCGTAAAGACATGCCTGACCACTCGAAGGAGGTCATTCATCACATGTCCCTGCTAGCCCAATTCAACCAGAGACTGATGGTGAAGCTTGTGGAAAAAGATGATCAAATTGAGAGATTAACACAGGCAAACCAGAAGCAAATCAAAGAGCTCAAACGAGAACAAGATGAGGAAATTGAGAGGCTAAAGAGGGAAATTGAAGAACAGGGCAAGCAAATCAAAAAGATGGCAGAAGAGACTCATGAACTAATGAAAGAAACAAAGCAAAGACTCACGCTTGAGAATCAGGATTTTGTTGCTACACCTGTCATGACCAACTATGAACAACACAAGAGGGACAATGACAGCTGGTACAGTGAGAGGTTCTATACCCACTTTCAAGGCTACAAGATGTGCCTGGGGGTGTATGCTAATGGAAAGGGTGATGGTAAAGGCACTCATGTGTCTTGGTATATCCACTTGATGCGTGGAGAATTTGACGATTATCTCAAGTGGCCGTTTCAAGGTAAGATTACTGTCCAGCTTCTCAACCAACGAGAAGATAAAGGTCATTATACGAGGTCTGTTGACTTTGGTGATGATACACACGGTGTACGAGTGACCAGTGGAAAGAGAGCCACTCCTTGTTGTGTGGAGCATACATGTCAGATGAGGGCTGGTGCCTATGTGGGTGATAGAAGGACTATGTGGATTCATCTGCCGCAGGTGCTCCTCGTAAATCTTACAGATACCTTTCCAAAAGGAAGTGGAGGAGAAGAGTGGAAAGAAGAGAGTAGTCTCACTCTTAGACTACCTCCTTCATCTAGCTCTCCTCACCTCGGGGATGACTGGGACTCAGACGACGAGGAAGATGGCTTGGCTGATCAGTCACCACTCGATATGTCTTGGGTCCCAGTGCATACTTTCAGGGTGGCTGTAAGTTCTTTGCCTGGGAACAGACTGGCCGGAGCCAGGAGAAGTCTAGTGGCTGATCTGGTAACATTAAAAGAGGCAGGAATACAGGATGTGTTCATCCTGTGCAGTGATACTGAACTGACCAGTTGTATAGATGGTTATGGATGGTCTTGCCTCCTGCTGAGCCTCTTGTCAATGTTACTGGACGAGGATCTACCACCTGAGGTAGCCATCGAGATTGTTCGTCAGCACAGAGGCCTACCAGCCATACAGACCATCAAGCAATATAACTTCATCATGGACTTCCGGAAACACTTGGCTGAATTCAGGGCACAGGGACAGTGGGGAAGGGCACTGGAACCACGTCCACCAACTTTTTCATGA

Transcript

ANN35092-RA

Protein

Uniprot

Uniprot term	Description
Q9BUZ4	TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1
Q61382	TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN=Traf4 PE=1 SV=2
P39429	TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF21355	TRAF-mep_MATH	TRAF/meprin, MATH domain	Domain	Interproscan
PF05706	CDKN3	Cyclin-dependent kinase inhibitor 3 (CDKN3)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR049342	Domain	TRAF1-6/MEP1A/B-like, MATH domain	Interproscan
IPR022778	Domain	CDKN3 domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR008974	Homologous_superfamily	TRAF-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan