Detailed information of ANN35093-RA in Leptoseris scabra

Genomic Location: Scaffold_76__1_contigs__length_70814:37836...39325
NR annotation: CAE7163554.1, hemF [Symbiodinium microadriaticum]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0KEX7Oxygen-dependent coproporphyrinogen-III oxidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=hemF PE=3 SV=1
B7V0Q9Oxygen-dependent coproporphyrinogen-III oxidase OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=hemF PE=3 SV=1
Q02V57Oxygen-dependent coproporphyrinogen-III oxidase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=hemF PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003796 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01300
all species →		Sua5_yciO_yrdCTelomere recombinationFamilyInterproscan
PF01218
all species →		Coprogen_oxidasCoproporphyrinogen III oxidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036406
all species →		Homologous_superfamilyOxygen-dependent coproporphyrinogen III oxidase superfamilyInterproscan
IPR001260
all species →		FamilyCoproporphyrinogen III oxidase, aerobicInterproscan
IPR006070
all species →		DomainThreonylcarbamoyl-AMP synthase-like domainInterproscan
IPR018375
all species →		Conserved_siteCoproporphyrinogen III oxidase, conserved siteInterproscan
IPR017945
all species →		Homologous_superfamilyDHBP synthase RibB-like alpha/beta domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10755
all species →		COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004109
all species →		Molecular Functioncoproporphyrinogen oxidase activityInterproscan
GO:0006779
all species →		Biological Processporphyrin-containing compound biosynthetic processInterproscan
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006782
all species →		Biological Processprotoporphyrinogen IX biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35093-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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