Detailed information of ANN35098-RA in Leptoseris scabra

Genomic Location: Scaffold_136__1_contigs__length_51291:32750...33478
NR annotation: WP_066014718.1, pyridoxamine 5'-phosphate oxidase [Endozoicomonas atrinae]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B7JZR4Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Rippkaea orientalis (strain PCC 8801 / RF-1) OX=41431 GN=pdxH PE=3 SV=1
B1WR90Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=pdxH PE=3 SV=1
A1TWZ3Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=pdxH PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003704 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01243
all species →		Putative_PNPOxPyridoxamine 5'-phosphate oxidaseDomainInterproscan
PF10590
all species →		PNP_phzG_CPyridoxine 5'-phosphate oxidase C-terminal dimerisation regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011576
all species →		DomainPyridoxamine 5'-phosphate oxidase, putativeInterproscan
IPR000659
all species →		FamilyPyridoxamine 5'-phosphate oxidaseInterproscan
IPR012349
all species →		Homologous_superfamilyFMN-binding split barrelInterproscan
IPR019740
all species →		Conserved_sitePyridoxamine 5'-phosphate oxidase, conserved siteInterproscan
IPR019576
all species →		DomainPyridoxine 5'-phosphate oxidase, dimerisation, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10851
all species →		PYRIDOXINE-5-PHOSPHATE OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004733
all species →		Molecular Functionpyridoxamine phosphate oxidase activityInterproscan
GO:0008615
all species →		Biological Processpyridoxine biosynthetic processInterproscan
GO:0010181
all species →		Molecular FunctionFMN bindingInterproscan
GO:0042823
all species →		Biological Processpyridoxal phosphate biosynthetic processInterproscan
GO:0016638
all species →		Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donorsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00275pdxH, PNPO; pyridoxamine 5'-phosphate oxidaseEC:1.4.3.5
Vitamin B6 metabolismko00750deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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