Detailed information of ANN35101-RA in Leptoseris scabra

Genomic Location: Scaffold_136__1_contigs__length_51291:41470...42120
NR annotation: WP_252026195.1, ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Endozoicomonas sp. SCSIO W0465]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I2U1ATP-dependent Clp protease proteolytic subunit 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=clpP1 PE=1 SV=1
Q60C68ATP-dependent Clp protease proteolytic subunit 1 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=clpP1 PE=3 SV=1
Q1QVW1ATP-dependent Clp protease proteolytic subunit OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=clpP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004342 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00574
all species →		CLP_proteaseClp proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033135
all species →		Active_siteClpP, histidine active siteInterproscan
IPR023562
all species →		FamilyClp protease proteolytic subunit /Translocation-enhancing protein TepAInterproscan
IPR001907
all species →		FamilyATP-dependent Clp protease proteolytic subunitInterproscan
IPR029045
all species →		Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR018215
all species →		Active_siteClpP, Ser active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10381
all species →		ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004176
all species →		Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252
all species →		Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006515
all species →		Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0009368
all species →		Cellular Componentendopeptidase Clp complexInterproscan
GO:0051117
all species →		Molecular FunctionATPase bindingInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01358clpP, CLPP; ATP-dependent Clp protease, protease subunitEC:3.4.21.92
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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