Gene detail

Detailed information of ANN35151-RA in Leptoseris scabra

Genomic Location: Scaffold_135__1_contigs__length_51350:16509...19676
NR annotation: MCG8312306.1, phosphoribosylformylglycinamidine synthase [Pseudomonadales bacterium]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35151-RA

ATGATTCGTAACACGACGGCGAAATCTCCAGAAGGCGTTTTGTCAGCTTATAAGGATAATGCCGCGGTTGCCGAAGGCTTTTTGGCAGAGAGATTATTTCCTTCAGCAGATGATCACCATTATCAGTATCACCAAGAGCCTATCCATATGCTCATGAAGGTGGAAACTCATAATCATCCGACAGCGATAGCGCCTTTCCCTGGAGCCGCTACAGGCTCAGGGGGAGAAATCCGTGATGAAGGAGCGACAGGTAGAGGCTCCAAACCTAAGGCAGGTCTCACAGGCTTTACCGTCTCTAATTTAAAGATTCCTGATTTAATGCAACCTTGGGAACAAGACTTTGGCAAGCCTGAGCGTATCGTCAGTTCCCTTGATGTCATGATTGAAGGCCCCATCGGTGGTGCTAGCTTTAATAATGAATTTGGCCGACCTAACCTTTCGGGTTATTTTCGTAGCTATGAAGTACCAGCAGCTGATAACGGCTACGGATGGGTCTGGGGTTATCATAAACCTATTATGATCGCCGGTGGTTTGGGAAATATTCGCCAAGAACATGTTGAAAAGGGCGAAGTCCCTTCCGGGGCCAAGCTCATTGTGCTTGGTGGTCCTGCGATGTTGATTGGCCTAGGAGGTGGTGCAGCCTCTTCAATGGCATCGGGCAGTAGTGATGCTGAACTGGACTTTGCCTCGGTACAAAGACATAACCCAGAAATGCAACGTCGTTGTCAGGAAGTCATTGATCAATGTTGGCAGCGAGGAGAACAGAATCCCATATTGTTTATTCATGATGTGGGTGCAGGTGGTTTATCGAATGCATTACCTGAGCTAGTCAGTGACGCTGGCTTAGGAGGGGACTTTGAGTTACGTGCCATTGCGTCGGCAGATTCTAGCCTCAGTCCCATGGAAATTTGGTGTAACGAAGCCCAGGAGCGCTATGTACTCGCTGTTGATCCTTCGCAGCTCGAAGAGTTCGTTGGTTTGTGTGAAAGAGAGCGTTGTCCTTATGCAGTGGTGGGCGAAGCCCGCCAAGAAGCCTTATTAAAAGTTCATGATGCCCAATTCGATAATCATACGGTTGATATGCCTTTGTCGACGTTACTGGGCAAACCACCCAAAATGCAACGCCAATTCCAACGCCAAGCTGTCACTTCAAAAGCCTTGGAATTATCTGGGGTCACAGCCAAAGAAGCCGCAGAGCGAGTCCTACAGTTACCTGCGGTTGCGAGCAAACAATTTCTCATTACGATTGGGGATCGCTCGATTACTGGTCTAGTACATCGTGATCAAATGGTCGGGCCTTGGCAAGTACCTGTGGCAGACGCCGCTGTGACTTTATCCAGTTATACAGGGTATAGCGGCGAAGCGATGGCGATGGGTGAGCGACCACCGGCTGCTATTATCAACCCAGCAGCGTCGGGTCGCTTAGCGATTGCTGAAGCGATTACCAATCTATTGTCCGCGCCAGTGAAACAGCTTTCGGATATTCGCCTGTCTGCAAACTGGATGGCAGCGGCAGGTACTGACGGGCAGGACCAAGCACTTTATGACACGGTAGAAGCCATTGCGATGTCGTTTTGTCCGCAGCTTGGTATTGCTATTCCTGTGGGCAAGGATTCATTGTCAATGCGTACCCAGTGGCAAGGAGCCGACAAACAAAGTCGTCAGGTGGTTTCGCCATTATCTTTAATTATTAGCGCCTTTGCTCCTCTAGAAGATGTGCGTCATAGCCTAACGCCTCAGTTGCAGCCACAAACTGATACCAGCATTTGGTTGATTGATTTAGGACGTGGCCAGCAACGCTTAGGAGCGAGTGCACTCGCCCAGGTTTATCAGCAAGTCGGGGATGAAACTGCGGATGTTGAAGCCTCCACTTTACTGGCCTTTGCTGAACTCATGGAGCAAATCCATAATCAGCAATTAGCGTTGGCTTATCATGACAGATCAGATGGCGGTTTGTTTGCCACTTTGTGTGAAATGGCATTTGCGGGTCATGTGGGTATTGATATTGATATTGCTCCATTAGTTGCCCAAGGTTCTGAGCTGAGTGCTTTGTTTAATGAAGAGCTGGGTGTTGTTATCCAAGTTAAGGATAAAGATGTTGCAGCTCTACAAAAATATGCGGCAGACGCAGGTTTACAAGATGATCTTCATCAATTAGGTCGTCCAAATACAGCGGGTCGTATTTGCATCAAGAATACTTCGACGGTGTTGGTTGAGGAAACCTGTAGTCACTATCATAAGCTATGGCATCTCACCAGCTATCACCTGCAGAAACTCAGAGATAATCCAACCTGTGCCAAAGCTGAGTATGAGGCTGTGGGTAACGATAGTGACCCAGGTTTAGCGTGTGTGCCGAAGTTTCAACGTGAATTACCGTTAATCAACACACAGGTTAAACCTAAAATTGCGGTCTTACGTGAGCAAGGCGTGAATGGCCATGTAGAAATGGCGGCGGCTTTTATGGCGGCAGGTTTTGATGCTATTGACGTCCATATGAGTGAGCTGATTAACACCCCTGATTTACTGCATCAGTTTAGTGGCTTTGTTGCCTGTGGTGGATTTTCCTATGGTGATGTTTTAGGTGCGGGTGAAGGTTGGGCGAAAAGTATTCTATACAATGATGCTTTACGAAGTTCATTTGAAAACTTCTTCGCTGATGAGTCACGTTTTGCTTTTGGTGTCTGTAATGGTTGTCAAATGCTATCGACTTTAAAGCCCTTGATACCAGGAGCAGAACATTGGCCGAAATTTGTTCGTAACGAATCCGAACAGTTTGAAGCACGCTTAGTTATGGTGGAAGTACTAGATTCTCCTTCGATCTTACTTAAGGATATGGTGGGAAGTCGACTCCCCGTTGTTGTGGCTCACGGTGAAGGGCGCGTGGAATTCTCGGGCGATGCGAGTGCGAATAAGCTTGTAGAGCTCCAGCAAGCCAGCTTGAGGTATGTGGATAATGCTGGAAACGCAACTCAGGCTTATCCGTTTAACCCCAATGGCTCTGAGTTAGGTTTAACGGGTATCACAGCCGCGAATGGGCGCGTCACACTCATGATGCCTCACCCTGAAAGAGTCGTTCGAAAAATTCAGTACTCTTGGGCTCCGTCGAGCATGCCAGAGCAAGGTCCCTGGAGTCGCTTATTTGCTAACGCCAGGGCTTGGTTGGACTAG

Transcript

ANN35151-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P15254	Phosphoribosylformylglycinamidine synthase OS=Escherichia coli (strain K12) OX=83333 GN=purL PE=1 SV=3
P74881	Phosphoribosylformylglycinamidine synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=purL PE=1 SV=3
Q32D15	Phosphoribosylformylglycinamidine synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=purL PE=3 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004535 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF13507 all species →	GATase_5	CobB/CobQ-like glutamine amidotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010073 all species →	Family	Phosphoribosylformylglycinamidine synthase PurL	Interproscan
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10099 all species →	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004642 all species →	Molecular Function	phosphoribosylformylglycinamidine synthase activity	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01952	PFAS, purL; phosphoribosylformylglycinamidine synthase	EC:6.3.5.3	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.