Detailed information of ANN35158-RA in Leptoseris scabra

Genomic Location: Scaffold_383__1_contigs__length_39142:25519...26345
NR annotation: WP_066016152.1, quinone-dependent dihydroorotate dehydrogenase [Endozoicomonas atrinae]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3PIL8Dihydroorotate dehydrogenase (quinone) OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=pyrD PE=3 SV=1
A4XWQ0Dihydroorotate dehydrogenase (quinone) OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=pyrD PE=3 SV=1
A6V325Dihydroorotate dehydrogenase (quinone) OS=Pseudomonas paraeruginosa (strain DSM 24068 / PA7) OX=381754 GN=pyrD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004713 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01180
all species →		DHO_dhDihydroorotate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005719
all species →		FamilyDihydroorotate dehydrogenase, class 2Interproscan
IPR005720
all species →		DomainDihydroorotate dehydrogenase, catalyticInterproscan
IPR012135
all species →		FamilyDihydroorotate dehydrogenase, class 1/ 2Interproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR050074
all species →		FamilyDihydroorotate dehydrogenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48109
all species →		DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004152
all species →		Molecular Functiondihydroorotate dehydrogenase activityInterproscan
GO:0006207
all species →		Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016627
all species →		Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0006222
all species →		Biological ProcessUMP biosynthetic processInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0009220
all species →		Biological Processpyrimidine ribonucleotide biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00254DHODH, pyrD; dihydroorotate dehydrogenaseEC:1.3.5.2
Pyrimidine metabolismko00240deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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