Detailed information of ANN35160-RA in Leptoseris scabra

Genomic Location: Scaffold_383__1_contigs__length_39142:31740...32769
NR annotation: WP_020583895.1, UDP-glucose 4-epimerase GalE [Endozoicomonas elysicola]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P55180UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) OX=224308 GN=galE PE=1 SV=1
P24325UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=galE PE=3 SV=2
Q9CNY5UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=galE PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004276 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR005886
all species →		FamilyUDP-glucose 4-epimeraseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43725
all species →		UDP-GLUCOSE 4-EPIMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003978
all species →		Molecular FunctionUDP-glucose 4-epimerase activityInterproscan
GO:0006012
all species →		Biological Processgalactose metabolic processInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0033499
all species →		Biological Processgalactose catabolic process via UDP-galactoseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01784galE, GALE; UDP-glucose 4-epimeraseEC:5.1.3.2
O-Antigen nucleotide sugar biosynthesisko00541deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP