Detailed information of ANN35179-RA in Leptoseris scabra

Genomic Location: Scaffold_186__1_contigs__length_46377:8148...10740
NR annotation: KAG1707588.1, Porphobilinogen deaminase [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B0TJ54Porphobilinogen deaminase OS=Shewanella halifaxensis (strain HAW-EB4) OX=458817 GN=hemC PE=3 SV=1
A8GZG4Porphobilinogen deaminase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=hemC PE=3 SV=1
Q088L3Porphobilinogen deaminase OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04397LytTRLytTr DNA-binding domainDomainInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF02602HEM4Uroporphyrinogen-III synthase HemDFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007492DomainLytTR DNA-binding domainInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR036108Homologous_superfamilyTetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamilyInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR003754DomainTetrapyrrole biosynthesis, uroporphyrinogen III synthaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0004852Molecular Functionuroporphyrinogen-III synthase activityInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan

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