Detailed information of ANN35186-RA in Leptoseris scabra

Genomic Location: Scaffold_440__1_contigs__length_37958:8986...9330
NR annotation: MBT3711550.1, 50S ribosomal protein L17 [Gammaproteobacteria bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B4RT54Large ribosomal subunit protein bL17 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rplQ PE=3 SV=1
A6W366Large ribosomal subunit protein bL17 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=rplQ PE=3 SV=1
Q15X47Large ribosomal subunit protein bL17 OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=rplQ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004864 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01196
all species →		Ribosomal_L17Ribosomal protein L17FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000456
all species →		FamilyLarge ribosomal subunit protein bL17Interproscan
IPR036373
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR047859
all species →		Conserved_siteLarge ribosomal subunit protein bL17, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14413
all species →		RIBOSOMAL PROTEIN L17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35186-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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