Gene detail

Detailed information of ANN35198-RA in Montipora grisea

Genomic Location: Scaffold_5326__1_contigs__length_29690:9202...10179
NR annotation: MBI3246662.1, transcription termination factor Rho [Deltaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O83281	Transcription termination factor Rho OS=Treponema pallidum (strain Nichols) OX=243276 GN=rho PE=3 SV=1
Q9ZLS9	Transcription termination factor Rho OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=rho PE=3 SV=1
P56466	Transcription termination factor Rho OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=rho PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00006	ATP-synt_ab	ATP synthase alpha/beta family, nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR004665	Family	Transcription termination factor Rho	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000194	Domain	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46425	TRANSCRIPTION TERMINATION FACTOR RHO	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006353	Biological Process	DNA-templated transcription termination	Interproscan
GO:0008186	Molecular Function	ATP-dependent activity, acting on RNA	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03628	rho; transcription termination factor Rho	-	Messenger RNA biogenesis	ko03019	deepkoala