Gene detail

Detailed information of ANN35213-RA in Leptoseris scabra

Genomic Location: Scaffold_178__1_contigs__length_47106:12198...13504
NR annotation: WP_027896648.1, adenylosuccinate synthase [Pseudomonas thermotolerans]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B7V201	Adenylosuccinate synthetase OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=purA PE=3 SV=1
Q02F80	Adenylosuccinate synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=purA PE=3 SV=1
Q9HUM6	Adenylosuccinate synthetase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=purA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003486 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00709 all species →	Adenylsucc_synt	Adenylosuccinate synthetase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001114 all species →	Family	Adenylosuccinate synthetase	Interproscan
IPR042109 all species →	Homologous_superfamily	Adenylosuccinate synthetase, domain 1	Interproscan
IPR033128 all species →	Active_site	Adenylosuccinate synthase, active site	Interproscan
IPR042110 all species →	Homologous_superfamily	Adenylosuccinate synthetase, domain 2	Interproscan
IPR018220 all species →	Binding_site	Adenylosuccinate synthase, GTP-binding site	Interproscan
IPR042111 all species →	Homologous_superfamily	Adenylosuccinate synthetase, domain 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11846 all species →	ADENYLOSUCCINATE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004019 all species →	Molecular Function	adenylosuccinate synthase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0044208 all species →	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0046040 all species →	Biological Process	IMP metabolic process	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01939	purA, ADSS; adenylosuccinate synthase	EC:6.3.4.4	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.