Detailed information of ANN35229-RA in Leptoseris scabra

Genomic Location: Scaffold_381__1_contigs__length_39241:33491...35218
NR annotation: MBV1881382.1, PEP-CTERM-box response regulator transcription factor [Pseudomonadales bacterium]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q06065Regulatory protein AtoC OS=Escherichia coli (strain K12) OX=83333 GN=atoC PE=1 SV=2
P14375Transcriptional regulatory protein ZraR OS=Escherichia coli (strain K12) OX=83333 GN=zraR PE=1 SV=2
Q9APD9Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca OX=571 GN=zraR PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0092146 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02518
all species →		HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF00158
all species →		Sigma54_activatSigma-54 interaction domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002078
all species →		DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR036890
all species →		Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR003594
all species →		DomainHistidine kinase/HSP90-like ATPaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071
all species →		TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35229-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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