Gene detail

Detailed information of ANN35251-RA in Leptoseris scabra

Genomic Location: Scaffold_58__1_contigs__length_77876:71748...73982
NR annotation: WP_122426283.1, GDP-mannose 4,6-dehydratase [Pseudomonas viridiflava]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q56598	GDP-mannose 4,6-dehydratase OS=Vibrio cholerae OX=666 GN=gmd PE=3 SV=2
P0AC90	GDP-mannose 4,6-dehydratase OS=Escherichia coli O157:H7 OX=83334 GN=gmd PE=3 SV=1
P0AC89	GDP-mannose 4,6-dehydratase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=gmd PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016040	Domain	NAD(P)-binding domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006368	Family	GDP-mannose 4,6-dehydratase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43715	GDP-MANNOSE 4,6-DEHYDRATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008446	Molecular Function	GDP-mannose 4,6-dehydratase activity	Interproscan
GO:0019673	Biological Process	GDP-mannose metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01711	gmd, GMDS; GDPmannose 4,6-dehydratase	EC:4.2.1.47	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala