Gene detail

Detailed information of ANN35254-RA in Leptoseris scabra

Genomic Location: Scaffold_202__1_contigs__length_45303:21949...24318
NR annotation: WP_252017537.1, phosphopyruvate hydratase [Endozoicomonas sp. SCSIO W0465]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35254-RA

ATGGCTCAGATTGTTCTGCTTGGCAAAGGCGTATTCAACATAACCAATGGCTCCCCGGGTACGGCGGACAAAGTTGGCGACGCCAGCATTGCCGTTAGCGCCGATGGTGGTGGCTGCCCGTGGCCAGGTGATGTCAGTATTGGTGCCGACATTGTTCTTCCACTCTGGGCTGACCTGGCTCAGATAGTCGGTGAAATTATAAGTCGTGCCAGAACCGTCGGAACGGTGGACGACATAGATAGACTGATTGGGGATTTTCAGATCAGGATTGAGGGCAGCGATAACCGGGTCGTTCCACTTTTTGATCTTGCCCATATAAATGCTGGCAAGAATCTTGCCAGTCAGTTTCAGGTCGCCGGGCTTGATGCCTGGAATATTAACCACTGGTACGATGGCTCCCATAACCATTGGGAACTGAACCATACCTTCCTTGGCAAGCTGTTGGGCGTCAAGCGGTGCGTCGGTGGCGCCAAAATCAACGGTTTTAACAGTGATCTGGCGAATGCCGCCACCGGAGCCGATGGACTGATAGTTGACACGAACGCCGGTTTCCTTGTTGTACTCTTCTGCCCATTTGGCATAAATCGGATGCGGGAAACTGGCACCGGCACCATTGATGGTCTGGGCGCCAAGAGCGGTGTTGACAGCTTTGCGCAAACGTTTTACAAAATGAGTCAGATTTCGACGCAAGTCAGTCGTGACGCGGCATTAGCCTTGACTTATCCCATGACCGCTATCAAGGAAATCAAGGCTCGCGAAGTCCTCGATTCTCGTGGTAATCCAACCATCGAAGCTGATGTCACTCTTGAGTCTGGTGCCTTCGGTACTGCCTGCGCTCCCAGCGGTGCCTCTACCGGTTCTCGTGAAGCCCTGGAACTGCGTGATGGCGACAAGTCTCGCTACCTGGGCAAAGGCGTCTTGAAAGCTGTTGCCAACGTAAACGGCCCTATCCATGAAGCGCTGCTGGGTTTTGACGCCAATGACCAGCGCGGCCTGGACCAGAAGATGATCGATCTGGATGGGACTGAAAACAAGGCCAAGCTTGGCGCCAACGCCATCCTGGCCGTCTCTCTGGCTGCAGCTAAAGCCGCGGCGAAAGACAAAGGCATGCCTCTGTACGCTCACATCGCTGAGCTCAACGGTACCCCTGGTCAGTACACCATGCCAGTGCCGATGATGAACATCATCAACGGTGGCGAGCATGCGGACAACAACGTTGATATCCAGGAGTTCATGATCCAGCCTGTTGGTACCAACACTTTCGCTGAAGCGCTGCGCATAGGCTCTGAAGTGTTCCACGCTCTGAAAAAGGTTCTGTCTGACAAGGGCATGAGCACTGGCGTTGGCGACGAAGGCGGTTTTGCGCCGAACCTGGAGTCCAACGCTGAGGCTCTGGCTGTGATTGAAGAGGCTGTCGTCGCTGCCGGTTACAAACTGGGCACTGACGTTACTCTGGCCATGGACTGCGCTGCTTCTGAATTTTACAAAGACGGTCAGTACAACCTGAAAGGCGAAGGCAAAGTCTTTACCTCCAATGAATTCTCTGATTACCTGAAGGGCCTGACTGAGCAGTTCCCAATCATCTCCATTGAAGACGGCCTGGACGAGTCTGACTGGGACGGCTTCAAGTATCAGACTGAGCTGCTGGGCGACAAGATCCAGATCGTTGGCGATGACCTGTTCGTGACCAACACCAAGATCCTTAAAGAAGGCATCGACAGAGGCATCGCTAACTCCATTCTGATCAAGTTCAACCAGATTGGTACACTGAGCGAAACTCTGGACGCGATCAAGATGGCCAAAGACGCTGGTTACACCGCTATCATCTCTCACCGCTCTGGCGAAACTGAAGATGCCACCATCGCTGACCTGGCTGTTGGTACCTGTGCTGGCCAGATCAAGACCGGTTCTCTGTGCCGCTCTGACCGTGTTGCCAAGTACAACCAGCTGCTCCGTATCGAAGAGCAGCTCGCTGGCAAAGCGCCTTATCGTGGTATCGCTGAGATCAATTGCGCCCGATAA

Transcript

ANN35254-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8EBR0	Enolase OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=eno PE=3 SV=2
Q0HL72	Enolase OS=Shewanella sp. (strain MR-4) OX=60480 GN=eno PE=3 SV=1
Q0HXH0	Enolase OS=Shewanella sp. (strain MR-7) OX=60481 GN=eno PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002877 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03952 all species →	Enolase_N	Enolase, N-terminal domain	Domain	Interproscan
PF00113 all species →	Enolase_C	Enolase, C-terminal TIM barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020811 all species →	Domain	Enolase, N-terminal	Interproscan
IPR000941 all species →	Family	Enolase	Interproscan
IPR036849 all species →	Homologous_superfamily	Enolase-like, C-terminal domain superfamily	Interproscan
IPR020810 all species →	Domain	Enolase, C-terminal TIM barrel domain	Interproscan
IPR029017 all species →	Homologous_superfamily	Enolase-like, N-terminal	Interproscan
IPR020809 all species →	Conserved_site	Enolase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11902 all species →	ENOLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000015 all species →	Cellular Component	phosphopyruvate hydratase complex	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004634 all species →	Molecular Function	phosphopyruvate hydratase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01689	ENO1_2_3, eno; enolase 1/2/3	EC:4.2.1.11	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.