Gene detail

Detailed information of ANN35259-RA in Montipora grisea

Genomic Location: Scaffold_1966__1_contigs__length_47399:35789...36969
NR annotation: MBL9103694.1, sigma-54-dependent Fis family transcriptional regulator [Myxococcales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q06065	Regulatory protein AtoC OS=Escherichia coli (strain K12) OX=83333 GN=atoC PE=1 SV=2
P05407	Nif-specific regulatory protein OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=nifA PE=1 SV=4
P09570	Nif-specific regulatory protein OS=Azotobacter vinelandii OX=354 GN=nifA PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02954	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR002197	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan