Detailed information of ANN35282-RA in Leptoseris scabra

Genomic Location: Scaffold_1906__1_contigs__length_23995:145...1518
NR annotation: WP_094707710.1, glutamine--fructose-6-phosphate transaminase (isomerizing) [Hahella sp. CCB-MM4]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q88BX8Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=glmS PE=3 SV=2
Q87TT8Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=glmS PE=3 SV=2
Q9HT25Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=glmS PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002143 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01380
all species →		SISSIS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035466
all species →		DomainGlmS/AgaS, SIS domain 1Interproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR001347
all species →		DomainSIS domainInterproscan
IPR005855
all species →		FamilyGlucosamine-fructose-6-phosphate aminotransferase, isomerisingInterproscan
IPR035490
all species →		DomainGlmS/FrlB, SIS domain 2Interproscan
IPR046348
all species →		Homologous_superfamilySIS domain superfamilyInterproscan
IPR017932
all species →		DomainGlutamine amidotransferase type 2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10937
all species →		GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZINGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0097367
all species →		Molecular Functioncarbohydrate derivative bindingInterproscan
GO:1901135
all species →		Biological Processcarbohydrate derivative metabolic processInterproscan
GO:0004360
all species →		Molecular Functionglutamine-fructose-6-phosphate transaminase (isomerizing) activityInterproscan
GO:1901137
all species →		Biological Processcarbohydrate derivative biosynthetic processInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006002
all species →		Biological Processfructose 6-phosphate metabolic processInterproscan
GO:0006047
all species →		Biological ProcessUDP-N-acetylglucosamine metabolic processInterproscan
GO:0006487
all species →		Biological Processprotein N-linked glycosylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00820glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)EC:2.6.1.16
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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