Detailed information of ANN35283-RA in Leptoseris scabra

Genomic Location: Scaffold_1906__1_contigs__length_23995:5815...7945
NR annotation: MBM3538491.1, phosphogluconate dehydratase [Alphaproteobacteria bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P31961Phosphogluconate dehydratase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=edd PE=3 SV=3
P0ADF7Phosphogluconate dehydratase OS=Escherichia coli O157:H7 OX=83334 GN=edd PE=3 SV=1
P0ADF6Phosphogluconate dehydratase OS=Escherichia coli (strain K12) OX=83333 GN=edd PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0041492 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00920
all species →		ILVD_EDDDehydratase familyFamilyInterproscan
PF00580
all species →		UvrD-helicaseUvrD/REP helicase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042096
all species →		Homologous_superfamilyDihydroxy-acid dehydratase, C-terminalInterproscan
IPR020558
all species →		Conserved_siteDihydroxy-acid/6-phosphogluconate dehydratase, conserved siteInterproscan
IPR004786
all species →		Family6-phosphogluconate dehydrataseInterproscan
IPR014016
all species →		DomainUvrD-like helicase, ATP-binding domainInterproscan
IPR037237
all species →		Homologous_superfamilyIlvD/EDD, N-terminal domainInterproscan
IPR000581
all species →		FamilyDihydroxy-acid/6-phosphogluconate dehydrataseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43661
all species →		D-XYLONATE DEHYDRATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004456
all species →		Molecular Functionphosphogluconate dehydratase activityInterproscan
GO:0009255
all species →		Biological ProcessEntner-Doudoroff pathway through 6-phosphogluconateInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016836
all species →		Molecular Functionhydro-lyase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35283-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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