Detailed information of ANN35295-RA in Leptoseris scabra

Genomic Location: Scaffold_2367__1_contigs__length_17901:7090...8931
NR annotation: WP_029255106.1, MULTISPECIES: dihydroxy-acid dehydratase [Rhodococcus]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5YRV8Dihydroxy-acid dehydratase 3 OS=Nocardia farcinica (strain IFM 10152) OX=247156 GN=ilvD3 PE=3 SV=1
Q8NQZ9Dihydroxy-acid dehydratase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534) OX=196627 GN=ilvD PE=3 SV=1
A4QDM9Dihydroxy-acid dehydratase OS=Corynebacterium glutamicum (strain R) OX=340322 GN=ilvD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003009 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00920
all species →		ILVD_EDDDehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004404
all species →		FamilyDihydroxy-acid dehydrataseInterproscan
IPR037237
all species →		Homologous_superfamilyIlvD/EDD, N-terminal domainInterproscan
IPR020558
all species →		Conserved_siteDihydroxy-acid/6-phosphogluconate dehydratase, conserved siteInterproscan
IPR000581
all species →		FamilyDihydroxy-acid/6-phosphogluconate dehydrataseInterproscan
IPR042096
all species →		Homologous_superfamilyDihydroxy-acid dehydratase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43661
all species →		D-XYLONATE DEHYDRATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004160
all species →		Molecular Functiondihydroxy-acid dehydratase activityInterproscan
GO:0009082
all species →		Biological Processbranched-chain amino acid biosynthetic processInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016836
all species →		Molecular Functionhydro-lyase activityInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01687ilvD; dihydroxy-acid dehydrataseEC:4.2.1.9
Pantothenate and CoA biosynthesisko00770deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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