Gene detail

Detailed information of ANN35318-RA in Leptoseris scabra

Genomic Location: Scaffold_975__1_contigs__length_31120:11105...12178
NR annotation: WP_269675350.1, class II fructose-bisphosphate aldolase [Endozoicomonas sp. GU-1]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0AB72	Fructose-bisphosphate aldolase class 2 OS=Escherichia coli O157:H7 OX=83334 GN=fbaA PE=3 SV=2
P0AB71	Fructose-bisphosphate aldolase class 2 OS=Escherichia coli (strain K12) OX=83333 GN=fbaA PE=1 SV=2
P0AB73	Fructose-bisphosphate aldolase class 2 OS=Shigella flexneri OX=623 GN=fbaA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0014716 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01116 all species →	F_bP_aldolase	Fructose-bisphosphate aldolase class-II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000771 all species →	Family	Fructose-bisphosphate aldolase, class-II	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR006411 all species →	Family	Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30559 all species →	FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016832 all species →	Molecular Function	aldehyde-lyase activity	Interproscan
GO:0004332 all species →	Molecular Function	fructose-bisphosphate aldolase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01624	FBA, fbaA; fructose-bisphosphate aldolase, class II	EC:4.1.2.13	Methane metabolism	ko00680	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.