Detailed information of ANN35319-RA in Leptoseris scabra

Genomic Location: Scaffold_975__1_contigs__length_31120:15768...16844
NR annotation: WP_026258099.1, type I glyceraldehyde-3-phosphate dehydrogenase [Endozoicomonas elysicola]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50322Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=cbbGP PE=3 SV=1
P50321Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=cbbGC PE=3 SV=1
P27726Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=gap PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002620 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00044
all species →		Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF02800
all species →		Gp_dh_CGlyceraldehyde 3-phosphate dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020831
all species →		FamilyGlyceraldehyde/Erythrose phosphate dehydrogenase familyInterproscan
IPR020828
all species →		DomainGlyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainInterproscan
IPR020830
all species →		Active_siteGlyceraldehyde 3-phosphate dehydrogenase, active siteInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006424
all species →		FamilyGlyceraldehyde-3-phosphate dehydrogenase, type IInterproscan
IPR020829
all species →		DomainGlyceraldehyde 3-phosphate dehydrogenase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43148
all species →		GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016620
all species →		Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0051287
all species →		Molecular FunctionNAD bindingInterproscan
GO:0006006
all species →		Biological Processglucose metabolic processInterproscan
GO:0050661
all species →		Molecular FunctionNADP bindingInterproscan
GO:0004365
all species →		Molecular Functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00134GAPDH, gapA; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating)EC:1.2.1.12
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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