Gene detail

Detailed information of ANN35339-RA in Montipora grisea

Genomic Location: Scaffold_3657__1_contigs__length_35196:33292...34267
NR annotation: MXY54753.1, malate dehydrogenase [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A5WGM2	Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=mdh PE=3 SV=1
Q1Q932	Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5) OX=335284 GN=mdh PE=3 SV=1
Q4FQU7	Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4) OX=259536 GN=mdh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004875 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02866 all species →	Ldh_1_C	lactate/malate dehydrogenase, alpha/beta C-terminal domain	Domain	Interproscan
PF00056 all species →	Ldh_1_N	lactate/malate dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010945 all species →	Family	Malate dehydrogenase, type 2	Interproscan
IPR015955 all species →	Homologous_superfamily	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR022383 all species →	Domain	Lactate/malate dehydrogenase, C-terminal	Interproscan
IPR001557 all species →	Family	L-lactate/malate dehydrogenase	Interproscan
IPR001236 all species →	Domain	Lactate/malate dehydrogenase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23382 all species →	MALATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006108 all species →	Biological Process	malate metabolic process	Interproscan
GO:0016615 all species →	Molecular Function	malate dehydrogenase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0019752 all species →	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006107 all species →	Biological Process	oxaloacetate metabolic process	Interproscan
GO:0006734 all species →	Biological Process	NADH metabolic process	Interproscan
GO:0030060 all species →	Molecular Function	L-malate dehydrogenase (NAD+) activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00024	mdh; malate dehydrogenase	EC:1.1.1.37	Cysteine and methionine metabolism	ko00270	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.