Detailed information of ANN35342-RA in Montipora grisea

Genomic Location: Scaffold_3892__1_contigs__length_34117:5785...8040
NR annotation: MBX6321285.1, adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Rhodospirillaceae bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P9WH76Vitamin B12-dependent ribonucleoside-diphosphate reductase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=nrdZ PE=2 SV=1
P9WH77Vitamin B12-dependent ribonucleoside-diphosphate reductase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=nrdZ PE=1 SV=2
Q9HI70Vitamin B12-dependent ribonucleoside-diphosphate reductase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=Ta1475 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003633 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02867
all species →		Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF00317
all species →		Ribonuc_red_lgNRibonucleotide reductase, all-alpha domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050862
all species →		FamilyRibonucleoside diphosphate reductase class-2Interproscan
IPR013344
all species →		FamilyRibonucleotide reductase, adenosylcobalamin-dependentInterproscan
IPR000788
all species →		DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR013509
all species →		DomainRibonucleotide reductase large subunit, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43371
all species →		VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004748
all species →		Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0031419
all species →		Molecular Functioncobalamin bindingInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0009263
all species →		Biological Processdeoxyribonucleotide biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00525E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chainEC:1.17.4.1
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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