Gene detail

Detailed information of ANN35356-RA in Leptoseris scabra

Genomic Location: Scaffold_88__1_contigs__length_63600:28452...29378
NR annotation: WP_251811537.1, histone deacetylase family protein [Alkalimarinus sediminis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P72702	Uncharacterized protein slr0245 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=slr0245 PE=3 SV=1
Q9HXM1	Histone deacetylase-like amidohydrolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA3774 PE=1 SV=1
Q941D6	Histone deacetylase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HDA14 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00850	Hist_deacetyl	Histone deacetylase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050284	Family	Histone deacetylase and polyamine deacetylase	Interproscan
IPR000286	Family	Histone deacetylase family	Interproscan
IPR023696	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan
IPR037138	Homologous_superfamily	Histone deacetylase domain superfamily	Interproscan
IPR023801	Domain	Histone deacetylase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10625	HISTONE DEACETYLASE HDAC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004407	Molecular Function	histone deacetylase activity	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan