Gene detail

Detailed information of ANN35383-RA in Leptoseris scabra

Genomic Location: Scaffold_1065__1_contigs__length_30362:7301...9774
NR annotation: WP_083232765.1, prolyl oligopeptidase family serine peptidase [Endozoicomonas atrinae]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35383-RA

ATGAGCATACTGCATACGATCAATAAACCAGGGCAGCCAGTGGAGTTGTGCCTTCGTACGGCCAGCAGTGGTGATAGCGTGTTGCTGATCGAAGACGCTGTTTATGAGCTGCTGTCTCCTGATCAGAAGCTGAAGGCTTTGCCTGGAGAGACCCTCTTGAAAGCACCTGTCGCTCGTCAGATACCTCACACAATTACTGCCCACGGTCACAGCCGTATTGATGAATACCACTGGCTGCGTGATGAGCATTGGCAAAAGATTGTAGCTGGCGATCTGGATTTTATAAATCCGGAAATTCTGGAATACCTTAAGGCGGAGTATGCCTACAAAGATCATCAGATGGCTGACTATCAGGCAGTGAAAGAAAAACTTTATCAGGAGATACTGTCGCGCATTAAAGAGGATTATCAGTCCTGGCCGGTAAAGAAGGGGGCGTTTTTTTATTACTACCGGGAAGAGCAGGGGAAGAACTATCCCATTCTCTGTCGCCGGCAGTCTTCCATGACTGCGCCTGAGGAAATTTACCTAGACGTCAACCAGGAAGCTGATGGCAAAGACCTGTACATGTTTGGCCCATCAACCACCAACCGAGCCAACACTTTTTTGGCTTATGGTTACAATCTCACCGGCTCCATGGAACGCACCATCCGGGTCAGAAACCTTGAGACCGGGCTGGACTGCCCCTGGAGTTTCCATAACAGCACTGGCTCCGTGCTCTGGCTGGATAACGACCATCTGTTGGTGGTGGAGCGTGATGAGCAGGCCCGTGGCAAGCATGTTTACCGGATCAATATCCACCAAGGGCTGGAAGGTAAAGAGTTGCTGTTCTCCAAGCCTGATGAGTTCGATGGCATGTTTCTCTCTTTGGGGGAAACCACCGACCGTGAGTATTTGCTGGTTTATCTTGAAAGCGGCGGCAGTCAGGTGGTCTATCTTTCACCCCGCCGCACTATCGATTTTCGCCTTTTTGCCCACGGTACCGATGATGTGGTTTTTTACCTGGATCATTACCAGGGCGATTTTTACATTCTGACCAATCGCGATGGAGCCAATAACTTCCAGTTGTTCAAAACGCCGGTCAGTCAGTGGGAGCCGCAGCAGTGGCAGTTGCTGCAAAAAGAGAGCGACACTATCAGCCTTACCGATATCCACTTCTACAATCACTACCTGATAATTGAGCGGAAAAATAATGACCGCGCCCTGGATGAGTTGGTGGTGCAAGATATGGACACTGGCCAGCAGCGGGTCGTCACTATGCCTGATGAAGCTTATGACCTCAGTTTTTCCGGCGATTGGGATCATAACGCCACTACCGTCCGTCTGGATTATTCATCGCCAGTCATGCCTGCCACAGTGCTGGAGCTGGATTTGGCCACGGCGCAGACCAGCAAGGTCTATACCCGTGAGACCCCTAACTTTGACCCTGCAAGGTATGTGGTCAAGCGTGAGTACGCCACAGCCCGGGACGGTGAGCGGATTCCGGTAACCATTATTCATCAAAAAGGGCTGGTTCGTGACGGTAGCCATTCTGCCTTTATCTATGGCTATGGCTCCTACGGTTATGGTATGACTGCGGGCTTTTCATCCAAACTGTTCTGTCTGGTGGATCGGGGTTTCGTTTACGCAACAGCGCATATTCGCGGGGGCGACGAAAAAGGCTATCGCTGGTATCTCAACGGCAAAATGCGCCATAAAATGAACACCTTTCACGATTTTATTGACACCACTGAGCACCTGATTGAACAGGGCTACACTGCCCGGCAGCGCATCGCCATCAATGGCGGCAGCGCCGGAGGCTTGCTTATGGGGGCTGTCACTAACCTGCGCCCGGAACTATACGGCTGTGTGGTGGCTGATGTGCCTTTTGTCGATGTGGTCAATACCATCAGTGACGCTTCCCTGCCATTGACTCCGCCTGAGTGGGAAGAGTGGGGGAACCCGCTGACCAGCGCTGAGGATTTTCACTGCATCATGGCGTATTCACCCTACGATAATGTGCAGGCCATTGACTATCCACCCATGCTGTTCAATTCCGGTATTTCTGATGAACAGGTGACCTACTGGGAGCCAACCAAAATGGTCGCCCGGCTTCGAGCCACGAAAACGGATGATAACCTGTTGCTTCTCAATATGAATATGCACGCTGGCCATGCTGGCGCCAGCAAACGCTATGAATGGATTGACGAAGTGGCATTTAACTACGCATTTGTCTTGAAATGCTTTGGCATCGAACAGTAG

Transcript

ANN35383-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O07834	Dipeptidyl aminopeptidase BI OS=Pseudoxanthomonas mexicana OX=128785 GN=dapb1 PE=1 SV=1
P24555	Protease 2 OS=Escherichia coli (strain K12) OX=83333 GN=ptrB PE=1 SV=2
Q59536	Protease 2 OS=Moraxella lacunata OX=477 GN=ptrB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002666 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00326 all species →	Peptidase_S9	Prolyl oligopeptidase family	Domain	Interproscan
PF02897 all species →	Peptidase_S9_N	Prolyl oligopeptidase, N-terminal beta-propeller domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002470 all species →	Family	Peptidase S9A, prolyl oligopeptidase	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR001375 all species →	Domain	Peptidase S9, prolyl oligopeptidase, catalytic domain	Interproscan
IPR027396 all species →	Homologous_superfamily	DsrEFH-like	Interproscan
IPR051543 all species →	Family	Serine Peptidase S9A Subfamily	Interproscan
IPR023302 all species →	Domain	Peptidase S9A, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11757 all species →	PROTEASE FAMILY S9A OLIGOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01354	ptrB; oligopeptidase B	EC:3.4.21.83	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.