Detailed information of ANN35395-RA in Leptoseris scabra

Genomic Location: Scaffold_2267__1_contigs__length_20181:2238...4656
NR annotation: WP_130167197.1, MULTISPECIES: D-aminoacyl-tRNA deacylase [Pseudoalteromonas]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3IJ42D-aminoacyl-tRNA deacylase OS=Pseudoalteromonas translucida (strain TAC 125) OX=326442 GN=dtd PE=3 SV=1
Q3KJE0D-aminoacyl-tRNA deacylase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=dtd PE=3 SV=1
A4VGD5D-aminoacyl-tRNA deacylase OS=Stutzerimonas stutzeri (strain A1501) OX=379731 GN=dtd PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005125 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09500
all species →		YiiD_CPutative thioesterase (yiiD_Cterm)DomainInterproscan
PF02580
all species →		Tyr_DeacylaseD-Tyr-tRNA(Tyr) deacylaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023509
all species →		Homologous_superfamilyD-aminoacyl-tRNA deacylase-like superfamilyInterproscan
IPR012660
all species →		DomainThioesterase, putativeInterproscan
IPR003732
all species →		FamilyD-aminoacyl-tRNA deacylase DTDInterproscan
IPR016181
all species →		Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR029069
all species →		Homologous_superfamilyHotDog domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10472
all species →		D-TYROSYL-TRNA TYR DEACYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002161
all species →		Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006399
all species →		Biological ProcesstRNA metabolic processInterproscan
GO:0051499
all species →		Molecular FunctionD-aminoacyl-tRNA deacylase activityInterproscan
GO:0051500
all species →		Molecular FunctionD-tyrosyl-tRNA(Tyr) deacylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35395-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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