Gene detail

Detailed information of ANN35396-RA in Leptoseris scabra

Genomic Location: Scaffold_2267__1_contigs__length_20181:11625...13031
NR annotation: WP_054552391.1, MULTISPECIES: glutamate--ammonia ligase [Pseudoalteromonas]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9KNJ2	Glutamine synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=glnAv PE=3 SV=1
P19904	Glutamine synthetase OS=Vibrio alginolyticus OX=663 GN=glnA PE=3 SV=1
P0A9C7	Glutamine synthetase OS=Escherichia coli O157:H7 OX=83334 GN=glnA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009984 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03951 all species →	Gln-synt_N	Glutamine synthetase, beta-Grasp domain	Domain	Interproscan
PF00120 all species →	Gln-synt_C	Glutamine synthetase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008147 all species →	Domain	Glutamine synthetase, N-terminal domain	Interproscan
IPR027302 all species →	Conserved_site	Glutamine synthetase, N-terminal conserved site	Interproscan
IPR036651 all species →	Homologous_superfamily	Glutamine synthetase, N-terminal domain superfamily	Interproscan
IPR008146 all species →	Domain	Glutamine synthetase, catalytic domain	Interproscan
IPR001637 all species →	Conserved_site	Glutamine synthetase class-I, adenylation site	Interproscan
IPR004809 all species →	Family	Glutamine synthetase type I	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR027303 all species →	Conserved_site	Glutamine synthetase, glycine-rich site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43407 all species →	GLUTAMINE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004356 all species →	Molecular Function	glutamine synthetase activity	Interproscan
GO:0006542 all species →	Biological Process	glutamine biosynthetic process	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0019740 all species →	Biological Process	nitrogen utilization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01915	glnA, GLUL; glutamine synthetase	EC:6.3.1.2	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.