Genomic Location: Scaffold_1103__1_contigs__length_30018:3934...5859
NR annotation: WP_104157038.1, threonine--tRNA ligase [Pokkaliibacter plantistimulans]
Species abbreviation LSCAB · all data for this species · gene families
| CDS |
| ANN35398-RA |
| Transcript |
| ANN35398-RA |
| Protein |
| ANN35398-RA |
| UniProt accession | Description |
|---|---|
| C3JZN7 | Threonine--tRNA ligase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=thrS PE=3 SV=1 |
| C1DF42 | Threonine--tRNA ligase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=thrS PE=3 SV=1 |
| Q4ZUG7 | Threonine--tRNA ligase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=thrS PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002442 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07973 all species → | tRNA_SAD | Threonyl and Alanyl tRNA synthetase second additional domain | Domain | Interproscan |
| PF00587 all species → | tRNA-synt_2b | tRNA synthetase class II core domain (G, H, P, S and T) | Domain | Interproscan |
| PF02824 all species → | TGS | TGS domain | Domain | Interproscan |
| PF03129 all species → | HGTP_anticodon | Anticodon binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012947 all species → | Domain | Threonyl/alanyl tRNA synthetase, SAD | Interproscan |
| IPR006195 all species → | Domain | Aminoacyl-tRNA synthetase, class II | Interproscan |
| IPR045864 all species → | Homologous_superfamily | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Interproscan |
| IPR004095 all species → | Domain | TGS | Interproscan |
| IPR002314 all species → | Domain | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) | Interproscan |
| IPR036621 all species → | Homologous_superfamily | Anticodon-binding domain superfamily | Interproscan |
| IPR033728 all species → | Domain | Threonine-tRNA ligase catalytic core domain | Interproscan |
| IPR002320 all species → | Family | Threonine-tRNA ligase, class IIa | Interproscan |
| IPR018163 all species → | Homologous_superfamily | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily | Interproscan |
| IPR047246 all species → | Domain | Threonine-tRNA ligase, class IIa, anticodon-binding domain | Interproscan |
| IPR012676 all species → | Homologous_superfamily | TGS-like | Interproscan |
| IPR012675 all species → | Homologous_superfamily | Beta-grasp domain superfamily | Interproscan |
| IPR004154 all species → | Domain | Anticodon-binding | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11451 all species → | THREONINE-TRNA LIGASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004812 all species → | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0043039 all species → | Biological Process | tRNA aminoacylation | Interproscan |
| GO:0000166 all species → | Molecular Function | nucleotide binding | Interproscan |
| GO:0006418 all species → | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0004829 all species → | Molecular Function | threonine-tRNA ligase activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006435 all species → | Biological Process | threonyl-tRNA aminoacylation | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01868 | TARS, thrS; threonyl-tRNA synthetase | EC:6.1.1.3 | Transfer RNA biogenesis | ko03016 | deepkoala |
