Detailed information of ANN35406-RA in Leptoseris scabra

Genomic Location: Scaffold_425__1_contigs__length_38252:5072...6301
NR annotation: WP_207060589.1, phosphoglycerate dehydrogenase [Motiliproteus sp. SC1-56]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0A9T2D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O157:H7 OX=83334 GN=serA PE=3 SV=2
P0A9T1D-3-phosphoglycerate dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=serA PE=3 SV=2
P0A9T0D-3-phosphoglycerate dehydrogenase OS=Escherichia coli (strain K12) OX=83333 GN=serA PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003616 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02826
all species →		2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domainDomainInterproscan
PF00389
all species →		2-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006140
all species →		DomainD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainInterproscan
IPR029753
all species →		Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved siteInterproscan
IPR002912
all species →		DomainACT domainInterproscan
IPR006139
all species →		DomainD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainInterproscan
IPR045865
all species →		Homologous_superfamilyACT-like domainInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR050857
all species →		FamilyD-isomer specific 2-hydroxyacid dehydrogenasesInterproscan
IPR029752
all species →		Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42789
all species →		D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_6G10090)Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0051287
all species →		Molecular FunctionNAD bindingInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00058serA, PHGDH; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductaseEC:1.1.1.95
EC:1.1.1.399
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP