Gene detail

Detailed information of ANN35407-RA in Leptoseris scabra

Genomic Location: Scaffold_425__1_contigs__length_38252:14195...15394
NR annotation: WP_207060582.1, phosphoglycerate kinase [Motiliproteus sp. SC1-56]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1U543	Phosphoglycerate kinase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=pgk PE=3 SV=1
Q6FB08	Phosphoglycerate kinase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=pgk PE=3 SV=1
A4XPG4	Phosphoglycerate kinase OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=pgk PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002908 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00162 all species →	PGK	Phosphoglycerate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001576 all species →	Family	Phosphoglycerate kinase	Interproscan
IPR015824 all species →	Homologous_superfamily	Phosphoglycerate kinase, N-terminal	Interproscan
IPR036043 all species →	Homologous_superfamily	Phosphoglycerate kinase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11406 all species →	PHOSPHOGLYCERATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004618 all species →	Molecular Function	phosphoglycerate kinase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0043531 all species →	Molecular Function	ADP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00927	PGK, pgk; phosphoglycerate kinase	EC:2.7.2.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.