Gene detail

Detailed information of ANN35409-RA in Leptoseris scabra

Genomic Location: Scaffold_425__1_contigs__length_38252:19231...20604
NR annotation: WP_143235255.1, adenosylhomocysteinase [Aliidiomarina halalkaliphila]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1I3W5	Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=ahcY PE=3 SV=1
A4XPF3	Adenosylhomocysteinase OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=ahcY PE=3 SV=1
Q2SLT4	Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=ahcY PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001227 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05221 all species →	AdoHcyase	S-adenosyl-L-homocysteine hydrolase	Domain	Interproscan
PF00670 all species →	AdoHcyase_NAD	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000043 all species →	Family	Adenosylhomocysteinase-like	Interproscan
IPR015878 all species →	Domain	S-adenosyl-L-homocysteine hydrolase, NAD binding domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR020082 all species →	Conserved_site	S-adenosyl-L-homocysteine hydrolase, conserved site	Interproscan
IPR042172 all species →	Homologous_superfamily	Adenosylhomocysteinase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23420 all species →	ADENOSYLHOMOCYSTEINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004013 all species →	Molecular Function	adenosylhomocysteinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0033353 all species →	Biological Process	S-adenosylmethionine cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01251	AHCY, ahcY; adenosylhomocysteinase	EC:3.13.2.1	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.