Gene detail

Detailed information of ANN35413-RA in Leptoseris scabra

Genomic Location: Scaffold_587__1_contigs__length_35512:31970...33413
NR annotation: CAI4015388.1, unnamed protein product [Cladocopium goreaui]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O05389	Uncharacterized oxidoreductase YrbE OS=Bacillus subtilis (strain 168) OX=224308 GN=yrbE PE=3 SV=2
A0A0F7VN41	Myo-inositol dehydrogenase Hyg17 OS=Streptomyces leeuwenhoekii OX=1437453 GN=hyg17 PE=1 SV=1
A4FID1	Inositol 2-dehydrogenase 2 OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=iolG2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002264 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02894 all species →	GFO_IDH_MocA_C	Oxidoreductase family, C-terminal alpha/beta domain	Domain	Interproscan
PF01408 all species →	GFO_IDH_MocA	Oxidoreductase family, NAD-binding Rossmann fold	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004104 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR000683 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42840 all species →	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006740 all species →	Biological Process	NADPH regeneration	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00010	iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase	EC:1.1.1.18 EC:1.1.1.369	Streptomycin biosynthesis	ko00521	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.