Detailed information of ANN35425-RA in Leptoseris scabra

Genomic Location: Scaffold_352__1_contigs__length_39822:12168...13908
NR annotation: WP_215819829.1, flagellar type III secretion system pore protein FliP [Zooshikella sp. WH53]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q51468Flagellar biosynthetic protein FliP OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=fliP PE=3 SV=2
P35528Flagellar biosynthetic protein FliP OS=Bacillus subtilis (strain 168) OX=224308 GN=fliP PE=3 SV=1
Q89AZ2Flagellar biosynthetic protein FliP OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=fliP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0018133 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00813
all species →
FliPFliP familyFamilyInterproscan
PF13432
all species →
TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005838
all species →
FamilyType III secretion system inner membrane P proteinInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30587
all species →
FLAGELLAR BIOSYNTHETIC PROTEIN FLIPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009306
all species →
Biological Processprotein secretionInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35425-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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