Detailed information of ANN35426-RA in Leptoseris scabra

Genomic Location: Scaffold_1929__1_contigs__length_23769:1064...2880
NR annotation: MCB1898412.1, acetoacetate--CoA ligase [Rhodocyclaceae bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z3R3Acetoacetyl-coenzyme A synthetase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=acsA2 PE=3 SV=2
Q9D2R0Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1
Q9JMI1Acetoacetyl-CoA synthetase OS=Rattus norvegicus OX=10116 GN=Aacs PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003979 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR005914
all species →		FamilyAcetoacetyl-CoA synthaseInterproscan
IPR020845
all species →		Conserved_siteAMP-binding, conserved siteInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42921
all species →		ACETOACETYL-COA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006629
all species →		Biological Processlipid metabolic processInterproscan
GO:0030729
all species →		Molecular Functionacetoacetate-CoA ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01907AACS, acsA; acetoacetyl-CoA synthetaseEC:6.2.1.16
Lipid biosynthesis proteinsko01004deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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