Gene detail

Detailed information of ANN35435-RA in Leptoseris scabra

Genomic Location: Scaffold_629__1_contigs__length_34935:5876...6667
NR annotation: WP_281715718.1, tryptophan 2,3-dioxygenase family protein [Alteromonas sp. CyTr2]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4RUH2	Tryptophan 2,3-dioxygenase OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=kynA PE=3 SV=1
Q6MM37	Tryptophan 2,3-dioxygenase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=kynA PE=3 SV=1
Q55DB4	Tryptophan 2,3-dioxygenase OS=Dictyostelium discoideum OX=44689 GN=tdo PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003312 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03301 all species →	Trp_dioxygenase	Tryptophan 2,3-dioxygenase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037217 all species →	Homologous_superfamily	Tryptophan/Indoleamine 2,3-dioxygenase-like	Interproscan
IPR004981 all species →	Family	Tryptophan 2,3-dioxygenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10138 all species →	TRYPTOPHAN 2,3-DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019441 all species →	Biological Process	tryptophan catabolic process to kynurenine	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004833 all species →	Molecular Function	tryptophan 2,3-dioxygenase activity	Interproscan
GO:0019442 all species →	Biological Process	tryptophan catabolic process to acetyl-CoA	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00453	TDO2, kynA; tryptophan 2,3-dioxygenase	EC:1.13.11.11	Tryptophan metabolism	ko00380	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.