Detailed information of ANN35441-RA in Leptoseris scabra

Genomic Location: Scaffold_1728__1_contigs__length_25344:22046...22780
NR annotation: WP_020582045.1, deoxyribose-phosphate aldolase [Endozoicomonas elysicola]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7MGB0Deoxyribose-phosphate aldolase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=deoC PE=3 SV=1
B7MNI8Deoxyribose-phosphate aldolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=deoC PE=3 SV=1
C4ZT63Deoxyribose-phosphate aldolase OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=deoC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013893 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01791
all species →		DeoCDeoC/LacD family aldolaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002915
all species →		FamilyDeoC/FbaB/LacD aldolaseInterproscan
IPR011343
all species →		FamilyDeoxyribose-phosphate aldolaseInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10889
all species →		DEOXYRIBOSE-PHOSPHATE ALDOLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016829
all species →		Molecular Functionlyase activityInterproscan
GO:0004139
all species →		Molecular Functiondeoxyribose-phosphate aldolase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009264
all species →		Biological Processdeoxyribonucleotide catabolic processInterproscan
GO:0016052
all species →		Biological Processcarbohydrate catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01619deoC, DERA; deoxyribose-phosphate aldolaseEC:4.1.2.4
Pentose phosphate pathwayko00030deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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