Gene detail

Detailed information of ANN35465-RA in Leptoseris scabra

Genomic Location: Scaffold_244__1_contigs__length_43152:15004...16822
NR annotation: KAJ8703687.1, hypothetical protein PYW08_016929 [Mythimna loreyi]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C1DRW0	Phosphoribosylformylglycinamidine cyclo-ligase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=purM PE=3 SV=1
B7GY98	Phosphoribosylformylglycinamidine cyclo-ligase OS=Acinetobacter baumannii (strain AB307-0294) OX=557600 GN=purM PE=3 SV=1
B7I5C6	Phosphoribosylformylglycinamidine cyclo-ligase OS=Acinetobacter baumannii (strain AB0057) OX=480119 GN=purM PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002833 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF00586 all species →	AIRS	AIR synthase related protein, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004607 all species →	Family	Phosphoribosylglycinamide formyltransferase	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR004733 all species →	Family	Phosphoribosylformylglycinamidine cyclo-ligase	Interproscan
IPR016188 all species →	Domain	PurM-like, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10520 all species →	TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004644 all species →	Molecular Function	phosphoribosylglycinamide formyltransferase activity	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0004641 all species →	Molecular Function	phosphoribosylformylglycinamidine cyclo-ligase activity	Interproscan
GO:0004637 all species →	Molecular Function	phosphoribosylamine-glycine ligase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0046084 all species →	Biological Process	adenine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01933	purM; phosphoribosylformylglycinamidine cyclo-ligase	EC:6.3.3.1	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.