Gene detail

Detailed information of ANN35484-RA in Leptoseris scabra

Genomic Location: Scaffold_206__1_contigs__length_45038:2093...3703
NR annotation: CAE7564914.1, trpE [Symbiodinium necroappetens]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2S999	Anthranilate phosphoribosyltransferase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=trpD PE=3 SV=1
A6VU64	Anthranilate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=trpD PE=3 SV=1
Q08654	Bifunctional protein TrpGD OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=trpGD PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0016057 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00591 all species →	Glycos_transf_3	Glycosyl transferase family, a/b domain	Family	Interproscan
PF02885 all species →	Glycos_trans_3N	Glycosyl transferase family, helical bundle domain	Domain	Interproscan
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005940 all species →	Family	Anthranilate phosphoribosyl transferase	Interproscan
IPR000312 all species →	Domain	Glycosyl transferase, family 3	Interproscan
IPR017459 all species →	Domain	Glycosyl transferase family 3, N-terminal domain	Interproscan
IPR006221 all species →	Domain	Anthranilate synthase/para-aminobenzoate synthase like domain	Interproscan
IPR036320 all species →	Homologous_superfamily	Glycosyl transferase family 3, N-terminal domain superfamily	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR035902 all species →	Homologous_superfamily	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43285 all species →	ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000162 all species →	Biological Process	tryptophan biosynthetic process	Interproscan
GO:0004048 all species →	Molecular Function	anthranilate phosphoribosyltransferase activity	Interproscan
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13497	trpGD; anthranilate synthase/phosphoribosyltransferase	EC:4.1.3.27 EC:2.4.2.18	Phenylalanine, tyrosine and tryptophan biosynthesis	ko00400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.