Gene detail

Detailed information of ANN35485-RA in Leptoseris scabra

Genomic Location: Scaffold_206__1_contigs__length_45038:8607...11567
NR annotation: KAG6333371.1, hypothetical protein ID866_5724 [Astraeus odoratus]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35485-RA

ATGGCATCCACACACGCACAAACGATCAAACGCGCACTTATCAGTGTTTCCGATAAAACAGGTATTGTTGACTTCGCTAAAGGACTCGCTGCAAAGGGCATTGAAATCATTTCAACTGGCGGTACTTATAAACTTCTAAAAGAGTCCGCTATTCCCGTCACAGAAATTTCCGCGTATACAGGTTTTCCTGAAATCATGGCTGGGCGGGTCAAAACCTTACACCCCAAAGTCCATGGCGGCATTCTTGCTCGACGTGGTATTGATGAGAACGTCATGCAAGAACAAGGTATTTCTGCGATCGACCTTGTTGTTGTCAACCTCTACCCGTTTAAAGAGACCATTGCTAGAGAAGGCGCCACCTTCGATGATGCCATCGAGAATATCGATATTGGTGGCCCAACCATGGTTCGTGCGAGTGCGAAAAATCATGCCTACGTCAGCATCATTACCGATCCCAATGACTATGCGACTTTCCTACAAGCATTAGAGGATAACGGCGGTATCAAACCCTCGATGCGATTTGAACTGGCCAAAAAAGCCTTTGCTCATACCGCAAGCTACGACAGTGCTATCAGCCACTACCTTGAGCAATTGAGCTTTCCTGAAGGCGCTGATTCTCCTAGCCAAACAACAGAAACGGATAGCTTCCCCGAGAACCTCAATCTGACTTGGCAACAGGTTCAAAGCCTACGCTATGGTGAAAACCCTCATCAGAAAGCCGCATTTTTCCGCCGCCCAGACGCACCCGAAGGGTCTTTGGCCAGCGCTCAATTAATTCAAGGCAAACCTCTGTCTTATAACAACATCGCTGATGCTGACGCCGCCTGGGAATGTGTTAGTAGTTTTGATACTTGCGCTTGTGTGATCGTCAAACATGCCAACCCCTGCGGTGTTGCCTTAGCGCCAACAAGCATTGAAGCTTACCAAAAAGCGTGGCAAACGGACGCCACTTCCGCATTTGGCGGCATCATTGCTTTCAACCAAATCGTTGATGAAGCGACACTCACCGCAATTTACGAAAAGCAATTTGTCGAAGTGATTATCGCTCCAAACTTTACCCCTGAAGCCATTAGCTACGCCAGTAAGAAAGCGAACGTACGATTGCTTTCCTGCGGCGCACTCGCGCCTAAAGAAGCAAGCTGGCAATTAAAAACCGTGACTGGCGGATTATTGGTTCAAGAAGTTGACCAAAAGGTAACTCTCGCTAGCGACCTTACGATCGTCAGCAAAAGACAACCCACCGATAGCGAAATCCAAGATCTGCTGTTTGCCTGGAATGTTGCCAAATTTGTAAAATCCAATGCCATCGTCTTTGCGAAATCACAGCAGACCGTAGGCGTAGGCGCAGGCCAGATGAGCCGTGTATACAGCACAAAAATAGCAGCTCTTAAGGCCGAAGAAGCCAAACTCCCGATTAAAGGTGCCGCGATGGCTTCAGATGCTTTCTTTCCCTTTAGAGATGGTATTGATACAGCTGCCCAATATGGCATCCAATCTGTGATACAACCCGGTGGCTCTATGCGCGACCAAGAAGTGATTGATGCCGCCGACGAAGCGGGCATTGCTATGCTCTTAATCATCGGTAGCGGCGGAAGAGAACATGCCCTAGCTTGGAAGGCAGCCCAATCACCAAACGTAGAAAAAATCTATGTCGCTCCTGGCAATGCAGGTACAGACAATGAAGCCAAGGTTGAGAACATCAATATTGGCGTTACAGACATTCCTGCGCTTGTGGAATTTGTCAAAAGCCATGCTATCGACCTCACCATTGTCGGCCCAGAAGCCCCTCTAGTCGCAGGTGTCGTGGACGCCTTTGAAAGCCAATCCTTAAAAATCTTTGGTCCAACTCAAGCTGCCGCCCAGTTGGAAGGCTCTAAAGCCTTTAGCAAAGATTTTTTGCAAAGGCACAAGATACCAACGGCAAGCTATCAAACCTTTACAGAAACCGCGCCCGCCATCGCTTACATCCGCGAATATGGAGCCCCCATTGTCGTTAAAGCCGATGGTTTAGCTGCCGGCAAAGGGGTCATTGTCGCGCAAACAGAAGACGAGGCTATAGCGGCAGTTAACGATATGCTCGACGAAGGCAGCTTTGGTGATGCCGGTGCTCGAGTGGTTATCGAAGAATTTCTTGTGGGTGAAGAAGCGAGCTTCATTGTCATGGTGGACGGCGAAGATATCCTTCCTCTAGCGAGCAGCCAGGATCACAAGGCCCGAGATAATGGCGACAAGGGCCCAAACACCGGCGGTATGGGTGCTTACTCGCCTGCCCCTATCGTCGATGCCGCAATGCATGATCATATCATGGCGACGGTTATTCGCCCCACCATCGATGGACTGGCTAAAGAAGGTATTCGCTATCGTGGATTCCTCTACGCGGGCCTCATGATTAGCCCAGCAGGCGATGCTAAAGTGCTTGAATTCAATTGCCGCTTCGGCGACCCAGAAACCCAGCCTATCTTGATGCGCCTTAAAACAGACCTAGCCGAACTCTGTCTTGCCGCCACTGAAAATAGGCTAGGCGCCTGTGAAGCTTCTTGGACAGAACAAGCCGCCGTAGGCGTAGTGATGGCCAGCGGCGGATATCCAAGTCATTACGCCAAAGGCCATACTATCCATGGTTTGGATGAGGTAGCCAAACTCTCTGACACAAAAGTATTCCACGCCGGAACACAAACCCAAGAAGGCCATTTTCAAAATCATGGCGGTAGAGTGCTGTGCGTCACCGCTTTAGGAGATTCGGTAACAGAGGCGCAAAAACGCGCTTATGAAGCTACCCAAAAGATTGAATGGCAGGATTGCTTTTACCGAACAGATATCGGCTATCGCGCCATTCAACGCGAAAAAAGCGCTAACGAATAA

Transcript

ANN35485-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0I557	Bifunctional purine biosynthesis protein PurH OS=Histophilus somni (strain 129Pt) OX=205914 GN=purH PE=3 SV=1
B0UWT1	Bifunctional purine biosynthesis protein PurH OS=Histophilus somni (strain 2336) OX=228400 GN=purH PE=3 SV=1
A7MXG0	Bifunctional purine biosynthesis protein PurH OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=purH PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002833 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01071 all species →	GARS_A	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Domain	Interproscan
PF02843 all species →	GARS_C	Phosphoribosylglycinamide synthetase, C domain	Domain	Interproscan
PF02142 all species →	MGS	MGS-like domain	Domain	Interproscan
PF02844 all species →	GARS_N	Phosphoribosylglycinamide synthetase, N domain	Domain	Interproscan
PF01808 all species →	AICARFT_IMPCHas	AICARFT/IMPCHase bienzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020561 all species →	Domain	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Interproscan
IPR036914 all species →	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan
IPR011607 all species →	Domain	Methylglyoxal synthase-like domain	Interproscan
IPR000115 all species →	Family	Phosphoribosylglycinamide synthetase	Interproscan
IPR002695 all species →	Family	Bifunctional purine biosynthesis protein PurH-like	Interproscan
IPR020560 all species →	Domain	Phosphoribosylglycinamide synthetase, C-domain	Interproscan
IPR024051 all species →	Homologous_superfamily	AICAR transformylase, duplicated domain superfamily	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR016193 all species →	Homologous_superfamily	Cytidine deaminase-like	Interproscan
IPR037123 all species →	Homologous_superfamily	Phosphoribosylglycinamide synthetase, C-domain superfamily	Interproscan
IPR020562 all species →	Domain	Phosphoribosylglycinamide synthetase, N-terminal	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR020559 all species →	Conserved_site	Phosphoribosylglycinamide synthetase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11692 all species →	BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004637 all species →	Molecular Function	phosphoribosylamine-glycine ligase activity	Interproscan
GO:0009113 all species →	Biological Process	purine nucleobase biosynthetic process	Interproscan
GO:0003937 all species →	Molecular Function	IMP cyclohydrolase activity	Interproscan
GO:0004643 all species →	Molecular Function	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN35485-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.