Gene detail

Detailed information of ANN35504-RA in Leptoseris scabra

Genomic Location: Scaffold_1972__1_contigs__length_23370:9008...11455
NR annotation: KAI8508455.1, Ubiquitin-60S ribosomal protein L40 [Branchiostoma belcheri]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P33190	Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahymena pyriformis OX=5908 GN=TUF11 PE=3 SV=2
P0DJ25	Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=RPL40 PE=1 SV=1
P14795	Ubiquitin-ribosomal protein eL40 fusion protein OS=Trypanosoma cruzi OX=5693 GN=FUS1 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UBL\|NEDD8
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019954	Conserved_site	Ubiquitin conserved site	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR050158	Family	Ubiquitin and ubiquitin-like	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10666	UBIQUITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019941	Biological Process	modification-dependent protein catabolic process	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan