Detailed information of ANN35523-RA in Montipora grisea

Genomic Location: Scaffold_4842__1_contigs__length_30981:5318...8443
NR annotation: OHD24645.1, polyribonucleotide nucleotidyltransferase [Spirochaetes bacterium GWB1_66_5]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q73NW1Polyribonucleotide nucleotidyltransferase OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=pnp PE=3 SV=1
O83856Polyribonucleotide nucleotidyltransferase OS=Treponema pallidum (strain Nichols) OX=243276 GN=pnp PE=3 SV=1
B2S4C3Polyribonucleotide nucleotidyltransferase OS=Treponema pallidum subsp. pallidum (strain SS14) OX=455434 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00675Peptidase_M16Insulinase (Peptidase family M16)FamilyInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF05193Peptidase_M16_CPeptidase M16 inactive domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011249Homologous_superfamilyMetalloenzyme, LuxS/M16 peptidase-likeInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR003029DomainS1 domainInterproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR004087DomainK Homology domainInterproscan
IPR011765DomainPeptidase M16, N-terminalInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR007863DomainPeptidase M16, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan

TOP