Gene detail

Detailed information of ANN35540-RA in Leptoseris scabra

Genomic Location: Scaffold_2321__1_contigs__length_19028:13210...14605
NR annotation: WP_133736510.1, Si-specific NAD(P)(+) transhydrogenase [Halospina denitrificans]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2SIP2	Soluble pyridine nucleotide transhydrogenase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=sthA PE=3 SV=1
A1U1Y5	Soluble pyridine nucleotide transhydrogenase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=sthA PE=3 SV=1
A6VW16	Soluble pyridine nucleotide transhydrogenase OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=sthA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0032696 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF02852 all species →	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR016156 all species →	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR050151 all species →	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan
IPR001100 all species →	Family	Pyridine nucleotide-disulphide oxidoreductase, class I	Interproscan
IPR004099 all species →	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912 all species →	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0004148 all species →	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00322	sthA, udhA; NAD(P) transhydrogenase	EC:1.6.1.1	Nicotinate and nicotinamide metabolism	ko00760	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.