Gene detail

Detailed information of ANN35545-RA in Leptoseris scabra

Genomic Location: Scaffold_48__1_contigs__length_92544:25589...26974
NR annotation: PIE41731.1, aspartate ammonia-lyase [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q51404	Fumarate hydratase class II 2 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=fumC2 PE=1 SV=1
Q9PD25	Fumarate hydratase class II OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=fumC PE=3 SV=1
Q87DC2	Fumarate hydratase class II OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=fumC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00206	Lyase_1	Lyase	Domain	Interproscan
PF10415	FumaraseC_C	Fumarase C C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005677	Family	Fumarate hydratase, class II	Interproscan
IPR000362	Family	Fumarate lyase family	Interproscan
IPR022761	Domain	Fumarate lyase, N-terminal	Interproscan
IPR024083	Homologous_superfamily	Fumarase/histidase, N-terminal	Interproscan
IPR018951	Domain	Fumarase C, C-terminal	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR020557	Conserved_site	Fumarate lyase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11444	ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004333	Molecular Function	fumarate hydratase activity	Interproscan
GO:0006106	Biological Process	fumarate metabolic process	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01679	E4.2.1.2B, fumC, FH; fumarate hydratase, class II	EC:4.2.1.2	Cushing syndrome	ko04934	deepkoala