Gene detail

Detailed information of ANN35555-RA in Montipora grisea

Genomic Location: Scaffold_240__1_contigs__length_137033:59224...61494
NR annotation: MXW37804.1, ATP-dependent DNA helicase RecG [Acidobacteriota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN35555-RA

ATGGCCGCAATCGACCCCGACACCGAAGTTCGGTACATCCCCGGCGTGGGCCCGAAGCGGGCGAAAGCGCTGAACCAGGCGGGGATCTTTCGCGCCGCGGATCTGCTGTTGCGGATGCCGTTTCGCTATGAACGGCGTGGCGAGCATCGGCCGTCGTCCGATCTGGCGCACGGCGACCAGGCCAGCGTCGACGTGACCGTCGAATCGCTCACCGTTCGACCGACCAGGCGCCCCAGGCTTCGCATCGTGGAGCTCGGCGCGCGGGACGACTCCGGGCCGGTGCGCGCCCTCTGGTTCAACCAGGTCTACTTGAAACGGGTCCTCCTGCCCGGACGCCGAGTGCGCCTTTCCGGGAAAGTGCAGCGCTCCGGGCGTGGCGGGATCCCCGAGTTCCGCAACCCGCGTTACTCGTTGATCCCCGCCGGGGACACCGGAGAACCGAAGGAGGCGGCGCCTCGGACCGGCGCGATCGCCTCCGACGGTCAGGTTCACCGACAAACCCCCACCCCTCCGGGGGCCCCGAGCCCGCTTCCGGCAGATCCGCACGCCGCAGCCGTTTTGCCGATCTACGAACGGATCGGACCGCTCACCGCCCCGGTGTTGCGCACTCTGATTCATCGCCTCATGGACAGTCCCGCGGGCAGCGCCCGGGGGCATTTGCCGACCGCAATCCGAGACCGGTTGGGTCTTTCCACCCGCGCCAAAGCCTTGCGGACGGTCCACTTTCCCGCGCCGGACGCCGAGATTTCCGCGCTCCGCGCTTGTCGTTCGGCAGGACACCGAAGGCTCATCGTGGAGGAGTTCTTCTGTTTCGCCCTCGGTCTCGCGCTCCGGCGGCGGCAAGACCGCAAAGGACGGCCATCGGATCAGGTCTTCGCCGTCGATGACGAACTGCGCGACCTGGTGCGCCGGGTCCTCCCCTTCCGGCTGACGCGATCTCAGCGTCGGACGCTTCAGACGATCGCCGACGAATTCGGTTCCCCGAGGACCATGCGCCGGCTCCTCCAGGGGGACGTGGGATCGGGGAAGACCATCGTCGCGGTGATCGCGGCGCTCATCGTGATTCACAACGGGGCTCAAGCGGCCCTGATGGCGCCCACCGAAGTTCTCGCCGAGCAGCACTTCACCACGGTGCGGAAGCTTCTGGAGCCGCATCGGATTCGCGTGGTCCTGCTCACCGCCGGACTCCCGGGAAGAGACAGGCGAGCGGCGCTGAACGCCATCCGGAGCGGGTGGGCGCAGTTCGTGATCGGCACCCATTCCCTGGTCCAGGAAGGGGCGGAATTCCGCCGACTTGGCTTCGCGATCGTCGACGAGCAGCACCGGTTCGGGGTGGATCACCGTCGCACCTTGGTGGAACGGGGCGGGGGATGCGACCTCTTGGTGATGACCGCGACCCCCATCCCGAGAACCCTGACGATGGCGCTGCACGGGGATCTCGATCTCTCCGAACTCCGCGATCTGCCTCCTGGTCGTCAACCGGTTCGCACGCTCGTCCGCGGGCTGGCAGAACTCCCGGAAGTCCATCGTCTGGCGCGCGAGGAAGTCGGTCGCGGCAGGCAGGTCTATTACGTGTGCCCGTTCATCGAAGAATCCGACACGACTCCCGGCGCCGGCGTCGAGGCGCGTTGCGCCGAGCTGCGAACCGGACCGTTCCGCGGGCTCCGCGTGGATCTGGTTCACGGCCGGATTCCCCGGGTGCGCCGCGAGGCGGTCATGACCGCGTTCGCCCAAGGCCGGCTCGATGTGCTGGTCGCCACGACGGTCATCGAGGTCGGGCTGGACGTGCCGAACGCGACCGTGATCGTCATCGAGGACGCGGACCGATTCGGTCTGGCTCAACTCCACCAGCTGCGCGGTCGCGTGGGGCGAGGGAAGGATCCTTCGACCGCGATCCTGGTCCACGGGAAGGATCCCACGGACGCTGGCTCGGCTCGGCTCCGGGTGCTCGAGGAGACGACCGATGGGTTCCGGATCGCCGAGCGCGATCTGGCGATGCGCGGCCCGGGCGATTTCCTCGGAACCCGTCAGTCCGGCGTTCCGCCATTTCGGGTCGCCGACATCATGCGAGACGCCGAGTTCCTGCGCCTCGCTCGGCGGGAAGCGGCCCGATTCCTGTCTCGCCATCCGGCGGCGGAGCCGCTTTCGGACTCGCCCGCGGACTTGCCCGGCGATGGCGCGTCGGCCCCGAAAGCGACCGAGGCGGAGCGCATCTTGGAACACGTTCGGAACACCTGGGGTGAACGTTTCGGGCTCACCGCCGGCGGCTGA

Transcript

ANN35555-RA

Protein

Uniprot

Uniprot term	Description
Q55681	ATP-dependent DNA helicase RecG OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=recG PE=3 SV=1
O34942	ATP-dependent DNA helicase RecG OS=Bacillus subtilis (strain 168) OX=224308 GN=recG PE=1 SV=1
Q54900	ATP-dependent DNA helicase RecG OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=recG PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17191	RecG_wedge	RecG wedge domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF19833	RecG_dom3_C	ATP-dependent DNA helicase RecG, domain 3, C-terminal	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR047112	Family	ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR033454	Domain	RecG, wedge domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045562	Domain	ATP-dependent DNA helicase RecG, domain 3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47964	ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03655	recG; ATP-dependent DNA helicase RecG	EC:5.6.2.4	DNA repair and recombination proteins	ko03400	deepkoala