Gene detail

Detailed information of ANN35556-RA in Montipora grisea

Genomic Location: Scaffold_240__1_contigs__length_137033:67908...70520
NR annotation: MXW38418.1, ADP-forming succinate--CoA ligase subunit beta [Acidobacteriota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN35556-RA

ATGAATCTGCACGAGCATCAGGCCAAGGCGCTCCTGGCCGATTACGGGGGTCCCGATCCCTCGGGGCAAGGTGGCGATCACTGCCGACGAAGCGGTGACCGCGGCGGGAGAACTCGGACTTCCGGTCGTGGTCAAGGCGCAGATCCACGCCGGCGGGCGGGGGAAGGCCGGCGGCGTCCGGCTGGCCCGGACCGAAGCCGAGGTACGGGCCGCGGCCGTCGCCATCCTCGACCGGGTTCTGGTGACCCGGCAGACGGGTCCGGAAGGCAGGTTGGTCCGGCGTCTGTTGATCGAGGAGGGCGTGGACATCGCCCAGGAGCTCTACGTCAGTTTCCTCGTCGATCGTTCGGCGAGTCGCCCGGTCTGTATCGCCAGCGCGGCGGGCGGCATGGATATCGAGGAGGTCGCCGCCAAGACGCCGGAGAAGATCCTGAACTTGGTCTTGGTCTCCAGCCGTTTCAGGCCCGGCGGCTGGCTCTTGCCCTCGGGCTCGCTGGCGAGGCGTTTCGAAACGCCGTTCCCTTCCTGCTGGCGCTCTACCGCGCCTTTGATCGGCTGGACGCGAGTCAAGTCGAGATCAACCCGATGCTGGTCACTGGGGCCGGGACGGTCCTGGCGCTGGATGCCAAGGTCTCGGTGGATGACAGCGCTCTCTTCCGTCAACCGAAGGTGGCTTCGCTTCGCGACATTCACGAGGAGTCACCGCTCGAGGTCGAGGCGAGCCGATTTCGGCTGAACTACATCAAGCTCGACGGCTCGGTGGGTTGCATGGTCAACGGCGCCGGGCTGGCGATGGCCACGATGGACATCGTGAAACTCGCCGGCGCTTCTCCGGCCAACTTTCTCGATGTCGGCGGCGGGGCGAATGCCGAGCAGATCGAGAACGCGTTTCGGATTCTGACCTCGGACCCGGACGTGCGGGCGGTGCTGATCAACATCTACGGGGGCATCTTGCGATGCGACCGGCTCGCCGCGGGACTCGTCGCCGCGGCGAAAAAGCTCGAGGTCCAGTTTCCGGTGGTGATCCGGATGGAGGGGACGAACGTGGAGATCGCCCGGCGCATGATCGAGGAGTCCGGGTTCGACTTCACGACCGCGACCGGAATGCAGGACGCCGCCGAGCACGTGGTCCGCAAGCTGGAGGCGGCCGGGGAGACGCGCCTCCTGGTGCAGGGCATCACCGGTCGCGAGGGCGCCTTTCACGCGCGAGCTTGCCGTGAATACGGGACCCAGGTGGTCGCCGGAGTGACCCCGGGCAAGGGCGGGCCTCGATCACGACCGGATTCCGGTCTTCGACACCGTCCTCGAGGCGGTGGCGAAGACTGGGGCCAACACCTCGCTGGTCTTGGTTCCCCCTCGCTTCGCCGCCGACGCGATGGCCGAGGCGGTGGATGGCGGGCTGGATCTGGTGGTCGGGATCACCGAAGGGATCCCGGCGCGAGACATGGTGCGCCTGGTCCGCGTCGCCTCGGAGACCCCAACCCGGATCCTGGGTCCCAACTGCCCTGGAGTCATTTCGCCGGGTCTGGCGAAGGCCGGGATCATGCCCGGATTCATCCATCGCCCAGGATCGGTCGGCGTGGTCTCTCGGAGCGGGACGCTGACCTACGAGGCGGTGCATCAGCTCAGCGAACGGGGCATCGGTCAGAGCAGTTGCGTGGGCATCGGGGGGGACCCGGTCATCGGAACCCACTTCGTGGACGTTCTCGAAATGTTCGGAGCCGACCCGGAGACCGAGGCGGTGGTCCTCATCGGAGAGATCGGCGGCAGCGCCGAGGAAGAGGCGGCCGATTTCATTCGCCGGGAGTTCAGCAAGCCGGTTGTCGGATTCATCGCCGGACAGACCGCTCCCCCGGGGCGCCGCATGGGGCACGCCGGCGCCATCGTGACCGGGGGGAAAGGGCACCGCGGCGGACAAGATCGAGGCGCTCTGTTCCGCCGGAGCGACGGTGGTCCGGAGTCCGGCCGAACTGGGTGCCGCCATGGACGCGGTGTTGCGAGATCGCTGAGTCTCGCGGGGGACCGATGCGAACACTGACCATCCTGAAACCGGACACCGTCGCCCAGGGCAACATCGGCGAAATCCTCGCGGTTGCTCGAAGGATCCGGGTTTCGTCCAGTGGCGATGCGGCTGGTGCATCTGACCAAGCGCGAGGCGGGGGGTTTTACGCGGTCCACCGCGACCGTCCGTTTTTTCTCGAGCCTTACCGACTTCATGGCTTCGGGTCCGGCGGTGGTCGCGGTGCTCGAACGCGAGGACGCGATCGCCGAGCTCCGCCGCCGAATGGGCGCGACGAACCCCGCCGATGCCGCCGAGGGAACCATCCGGGCCCGTTTCGCCAGCTCGATCGAGCGCAACGCGATTCACGGCTCCGACTCGCCGGAATCCGCGGCGTTCGAGATCGGTTACTTCTTCCCCGGCGTGGATCTGGTCTAGGAATTCCGGGCGAGCCCGGCGACAGGACCGAACCGTCAGCACCGGGAGACCGCTGGCGCCGAACCCATGCCGAGCATCAAGCCGGACCACTGGATCCGCCGCATGGCGCTCGGTCATCGGCTCATCCACCCGTTCGTCGACCGCCA

Transcript

ANN35556-RA

Protein

Uniprot

Uniprot term	Description
Q021N6	Succinate--CoA ligase [ADP-forming] subunit beta OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=sucC PE=3 SV=1
B3QWF8	Succinate--CoA ligase [ADP-forming] subunit beta OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) OX=517418 GN=sucC PE=3 SV=1
B3EFL3	Succinate--CoA ligase [ADP-forming] subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=sucC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08442	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF02629	CoA_binding	CoA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017866	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR013650	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR003781	Domain	CoA-binding	Interproscan
IPR005809	Family	Succinate--CoA ligase-like, beta subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11815	SUCCINYL-COA SYNTHETASE BETA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006104	Biological Process	succinyl-CoA metabolic process	Interproscan
GO:0042709	Cellular Component	succinate-CoA ligase complex	Interproscan