Gene detail

Detailed information of ANN35557-RA in Leptoseris scabra

Genomic Location: Scaffold_1496__1_contigs__length_26854:1138...3279
NR annotation: WP_167191696.1, methylmalonyl-CoA mutase [Aestuariicella hydrocarbonica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN35557-RA

ATGTCTGACAAGAAGCCTACACTGGCCGAATGGGAAGCCCTGGCCACCAAACAAACCAAAGGTCTAACGCCGGAAGAACTCACTTGGCATACGCCGGAAGGTATTGATATCAAGCCACTGTATACCAGTGCTGATACGGCAGATCTGGAATACGCAGATACCTTCCCTGGCATGGCGCCTTATATTCGCGGGCCCATGGCCACCATGTATGCAGGTCGTCCCTGGACCATCCGTCAGTACGCGGGCTTCTCCACTGCTGAAGAATCCAACGCCTTCTACCGCAAAAACCTGGCGGCAGGCGCCCAGGGCGTCTCAGTCGCCTTCGACCTGGCCACTCACCGGGGTTACGACTCCGACCACCCTCGCGTTTCCGGCGATGTGGGTAAAGCCGGTGTTGCCATCGACTCCGTCGAAGACATGAAAATCCTGTTCGACGGCATTCCGTTGGATAAAGTCTCCGTGTCTATGACTATGAACGGTGCGGTACTGCCTATTCTGGCGAACTACATTGTTGCGGCTGAAGAGCAAGGCGTTAGCCAGGACAAACTGGCCGGCACTATCCAGAACGATATTCTGAAAGAATTCATGGTGCGTAATACCTACATTTACCCACCTGAGCCCTCCATGAAAATTATCGGCGACATTATCGGATACACCTCCGAGTTCATGCCGAAATTTAACTCCATCTCCATCTCCGGCTACCACATTCAGGAAGCTGGTGCGGATGCCGCTCTGGAACTGGCCTACACCCTGTCTGATGGACGTGAATACGTGCGCACCGCGCTTAACGCCGGTCTGGACGTAGATGCCTTTGCACCTCGCCTGTCCTTCTTCTGGGGCATCTCCATGAACTTCTACATGGAAATTGCCAAGCTGCGCGCGGGTCGTCTGTTGTGGAACCGCATCATGGCGGAATTCAACCCGCAGAACCCGAAGTCTTCCATGCTGCGAACTCACAGCCAGACCTCTGGCTGGTCACTTACAGAGCAGGACCCCTATAACAACGTTGTACGAACCACCATTGAAGCTATGGCGGCGGTATTTGGCGGCACTCAGAGCTTGCACACCAACGCGCTGGACGAAGCCGTTGCCCTGCCCACGGAATTCTCCGCCCGTATCGCGCGGAATACCCAGATCCTTATTCAGGAAGAAACCGGCATTTGTCAGGTAGCTGACCCCTGGGGTGGCTCTTACATGATGGAAAGCCTGACCCAGCAAATTGCTGACAAGGCCTGGGAACTGATTGAAGAGATTGAGGAAAACGGCGGCATGGCCAAAGCCATTGAAGCTGGCCTGCCTAAGCTGCGTATTGAAGAATCTGCAGCGAAGAAACAAGCCCGTATTGACCGTGGCGAAGACGTCATCGTGGGTGTGAACAAATATATCCTTGAGGAAGAAGACGAGCTGGAAATCCTCGAAGTGGATAACGTCGCCGTGCGTGATTCACAAATCAAGCGCATTAATGAGATCCGTGCCAGCCGCGATAACGCTGCGGTTAAATCTGCACTGGACGATATCACTGCCGCTGCGGCTACCGGCCAGGGTAACCTGCTAGATCTGTCTGTGAAAGCTGCGCGACTGCGTGCAACGGTTGGTGAAATCTCTGACGCGATGGAAGAAGAGTTCGGCCGCTACAACGCCCAGGCTCGCACGATCTCAGGTGTTTACGGTGCCCCTTACGAAGACGACAGCGACTGGCAGACGATCAAGTCTGACATCGAAGCCTTCGAACAGGAGCAAGGCCGTCGCCCACGTATGCTGGTGTGTAAGATGGGGCAGGACGGACACGACCGCGGCGCTAAGGTAATTGCCACCGCCTTTGCCGATGTCGGCTTCGATATCGATCTGTCTCCCATGTTTTCCACCCCGGAAGAAGCTGCCAAGCAAGCGATTGAAAACGACGTTCACGTTGTCGGCGTTTCCTCTCAGGCGGCAGGTCACAAGACTCTGGTACCTGAGCTAATCGCTGAACTGAAGAAGCAAGGCGCGGAAGACATTATTGTTGTGGCCGGTGGAGTCATTCCGAAACAGGATTACGATTACCTATACGAGGCTGGTGTGAAAGGCATCTTTGGTCCCGGCACCAAGATTCCCGTCTCTGCCCGTCAGGTAATGGACGAGGTGCGCAAGGCCAACGCCTAA

Transcript

ANN35557-RA

Protein

Uniprot

Uniprot term	Description
Q3J4D7	Methylmalonyl-CoA mutase OS=Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=mcm PE=1 SV=1
Q8HXX1	Methylmalonyl-CoA mutase, mitochondrial OS=Macaca fascicularis OX=9541 GN=MMUT PE=2 SV=1
P16332	Methylmalonyl-CoA mutase, mitochondrial OS=Mus musculus OX=10090 GN=Mmut PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01642	MM_CoA_mutase	Methylmalonyl-CoA mutase	Family	Interproscan
PF02310	B12-binding	B12 binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006098	Domain	Methylmalonyl-CoA mutase, alpha chain, catalytic	Interproscan
IPR006099	Domain	Methylmalonyl-CoA mutase, alpha/beta chain, catalytic	Interproscan
IPR006158	Domain	Cobalamin (vitamin B12)-binding domain	Interproscan
IPR036724	Homologous_superfamily	Cobalamin-binding domain superfamily	Interproscan
IPR016176	Homologous_superfamily	Cobalamin (vitamin B12)-dependent enzyme, catalytic	Interproscan
IPR006159	Domain	Methylmalonyl-CoA mutase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48101	METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004494	Molecular Function	methylmalonyl-CoA mutase activity	Interproscan
GO:0031419	Molecular Function	cobalamin binding	Interproscan
GO:0016866	Molecular Function	intramolecular transferase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0019678	Biological Process	propionate metabolic process, methylmalonyl pathway	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016853	Molecular Function	isomerase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01847	MUT; methylmalonyl-CoA mutase	EC:5.4.99.2	Cobalamin transport and metabolism	ko04980	deepkoala