Detailed information of ANN35570-RA in Leptoseris scabra

Genomic Location: Scaffold_2154__1_contigs__length_21814:2321...4480
NR annotation: HHD78951.1, dicarboxylate/amino acid:cation symporter [Campylobacterota bacterium]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O59010Glutamate transporter homolog OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=PH1295 PE=1 SV=1
Q10901Excitatory amino acid transporter OS=Caenorhabditis elegans OX=6239 GN=glt-1 PE=1 SV=2
Q25605Excitatory amino acid transporter OS=Onchocerca volvulus OX=6282 GN=GLT-1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0018759 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00375
all species →		SDFSodium:dicarboxylate symporter familyFamilyInterproscan
PF00216
all species →		Bac_DNA_bindingBacterial DNA-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010992
all species →		Homologous_superfamilyIntegration host factor (IHF)-like DNA-binding domain superfamilyInterproscan
IPR001991
all species →		FamilySodium:dicarboxylate symporterInterproscan
IPR020816
all species →		Conserved_siteHistone-like DNA-binding protein, conserved siteInterproscan
IPR036458
all species →		Homologous_superfamilySodium:dicarboxylate symporter superfamilyInterproscan
IPR000119
all species →		FamilyHistone-like DNA-binding proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42865
all species →		PROTON/GLUTAMATE-ASPARTATE SYMPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006835
all species →		Biological Processdicarboxylic acid transportInterproscan
GO:0015293
all species →		Molecular Functionsymporter activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN35570-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP