Gene detail

Detailed information of ANN35604-RA in Montipora grisea

Genomic Location: Scaffold_6478__1_contigs__length_26932:4817...7896
NR annotation: CAE7635383.1, acsA2 [Symbiodinium pilosum]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN35604-RA

ATGAGCGATATTCGCCCCTACACCATTGAGATCTCTGACGCAGCCATAACCGACCTTAAGACGCGGCTTGCCATGACGCGCTGGCCTGAGGCTGAAACGCCGGACGATTGGAGTCAGGGTATTCCCCTCAGTTATACACAGGCGCTCGTTTCGTACTGGCAGAACGAGTACGACATGCAACGCCTGGCCACACGTCTGAATCGTTATGACAACTACCTGACGGAAATAGACGGTCTGGACATCCACTTCTTACACATCCGGTCTTCCAATGCGGACGCCAAACCGTTGTTGTTGACCCATGGATGGCCGGGGTCGGTTGTCGAGTTCTTGAAGAGCATTGGACCGCTCTCAGAGCCTCAGGATCACGGTGGCAAGGCCGAAGATGCGTTTCACCTGGTGATTCCCTCCCTGCCGGGGTTCGGTTTCAGTGGCAAACCAACTTCCCCAGGGTGGGGCACGCAGAAAACTGCCGAGGTCTGGGCCAAGCTCATGGCGCGACTGGGTTATGACAAATACCTCGCACAGGGCGGTGACTGGGGTGCCATTGTGACCACGCGCATCGGCGCGAGTGATCCAGACCATTGTGCCGCGATCCACCTCAATATGGTCGTTGTACCCCCTGACCCGGCCGCCGAGGACCTGACCCCGCTGGAGATTTCTGCGCTGGAAGGTCTCAAGTACTACCAGGACTGGGACTCCGGTTACTCTAAACAACAAAGCACCCGACCGCAGACGCTGGGTTACGGTCTGGTGGATTCCCCTGCCGGTCAGGCGGCGTGGATCGTCGAAAAATTCTGGGCCTGGATGGATTGTGACGGCAACCCGGAGAACGTGCTCACCAAAGATGAGCTGCTGGATAACGTGATGGTGTACTGGCTCAACGCAGCGGGGGCTTCTTCAGGCCGAATCTACTGGGAGTCGTTCGGAGCCGGAATCGGCACTGACCCGGTGCACGTCCCGATGGGCGGCACAATCTTCCCGAAAGAGATCTTCCGCACGTCACGTCGTTTTGCGGAGAAGTTCTTCACAAACATTGTGCACTGCCAGGAAGCCGTCGCTGCATCTCAGTTAACCGCCTTCGCAAATTGGGTTGAGAAAGAGTTTTTAATCACCTTTGACGATTATGCGGCGCTCCACAGATGGTCCGTGGCGCATCCGGATAAGTTCTGGTCGAGCTATCAGATATGGACTGGCATTCAGACCAGCCGGACCGCCCAGGTGCCCGTGGAAAATCTCGAACAGTTTCCCGGAGCCGTGTGGTTTCCGGGGGAACGGTTGAACTACGCAGAAAATCTGCTGGCGAACAGGAGCGCTAAGACAGCGGTCATCAGCATTCTCGAGAACGGCGAGCGGGAGGAAACCAGTTATGAGGCGCTGTACGCGCAGAGCGCCCGGCTTGCCCACACGCTGGCTGAACTGGGTATCCAAGCCAACGACCGCGTAGCGGCGTGGATGCCAAATATCACCGCAACCATCAGCGCCATGCTGGCAACCTCTTCGTTGGGTGCCGTCTGGTCCTCCTGTTCACCCGACTTCGGTGCACCAGGGGCGCTGGATCGTTTCGGACAGATCCGACCGAAGGTGTTGTTTGCCTGCGATGGCTACTACTACGGTGGCAAAGTCATCGATATCACCACAAAAGTCCGGCAGGTCGCTGCCCAGATTGACAGCATTGAACAGATTATCTGGGTGCCGGTACTCGGCAATGCACTTGAGCTGCAGGACAATGAGATAAGCTGGGAGGCTGCTCAACAAACTGCCTCACAGACGTTCGACTTCGCACAACTCCCATTCGATCATCCTCTGTACATCCTCTATTCAAGCGGGACCACGGGCAAACCAAAATGTATCGTCCACGGCCAGGGCGGCACGCTGCTTCAGCACAAAAAAGAGCACCAACTGCATCTGAATCTGACCCCGGAAGATCGGCTGTTTTTCTTTACAACGTGCGGTTGGATGATGTGGAACTGGGTCGTCAGTGCGCTGGCAAGTCAGTGTACGATCATCCTGTACGATGGCTCACCGCTGCACCCAAGCCCTGCGACCATGTTCGACATAGTGGACCAGGAAGCAGTCACCGTATTCGGCATCAGCGCAAAGTTTCTCTCCAGCGCCGAGAAAGCCGGCGTCACGCCTGCAGACAGCCACAATCTCGCCAGCATGCGCATGCTCATCAGCACCGGCAGCCCGTTGACCCACGAGGGGTACAACTATGTGTACGAACAGATAAAGTCGGACTGCCACCTGGTCTCCATGTCCGGTGGCACAGATCTGATTTCCTGCTTCATGCTGGGTAACCCCAACCTGCCGGTCTATGAAGGCGAACTGCAATCGCCCGGGCTCGGCATGGCTGTAGAGATCTGGGATGACAACGGCGAACGGGTATACGCAACCAAAGGCGAACTGGTCTGTACGCGTCCCTTTCCTTCCGCACCAATTGGTTTCTGGGACGATGTAGAGGACAAAAAGTACAAAGCCGCATATTTCGACCGCTTCCCCAACGTCTGGGTACATGGCGACTGGGCGGAGGAGACGCCATCCGGAGGCTACGTGATCTTTGGCCGCAGTGATGCGGTATTGAATCCAGGCGGTGTGCGCATTGGAACCGCAGAGATCTATCGTCAGGTTGAGCAGTTTGATGACGTCGTAGACGCCGTGTGCGTAGGCCAGGCATGGGCTGATGACGTACGTGTAGTGCTGTTTGTCGTGCTGCGCGACGGTACAGGCCTGACAGACGAACTCGTGAGCGAGATCAAGCTGAAAATACGCCAGCATGCGTCTCCCCGCCACGTACCCGCCAAGGTTGTGGCTGTAAAGGACATTCCACGCACTATGAGCGGCAAAATAGCAGAGCTTGCCGTGCGCGACGTCATTCATGGCCGCGAGGTCAAGAACACGTCCGCGTTAGCCAACCCAGAGGCGCTTAGTGAGTTTGCCGGACTGGAAGCTCTAACCCACTGA

Transcript

ANN35604-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Z3R3	Acetoacetyl-coenzyme A synthetase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=acsA2 PE=3 SV=2
Q9D2R0	Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1
Q9JMI1	Acetoacetyl-CoA synthetase OS=Rattus norvegicus OX=10116 GN=Aacs PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003979 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan
PF06441 all species →	EHN	Epoxide hydrolase N terminus	Family	Interproscan
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR005914 all species →	Family	Acetoacetyl-CoA synthase	Interproscan
IPR000639 all species →	Family	Epoxide hydrolase-like	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR010497 all species →	Domain	Epoxide hydrolase, N-terminal	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42921 all species →	ACETOACETYL-COA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0030729 all species →	Molecular Function	acetoacetate-CoA ligase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01907	AACS, acsA; acetoacetyl-CoA synthetase	EC:6.2.1.16	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.