Gene detail

Detailed information of ANN35620-RA in Leptoseris scabra

Genomic Location: Scaffold_1689__1_contigs__length_25577:6970...8387
NR annotation: CAI3980281.1, unnamed protein product [Cladocopium goreaui]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9FLB0	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana OX=3702 GN=RH18 PE=2 SV=1
Q54EC2	Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium discoideum OX=44689 GN=ddx55 PE=3 SV=1
Q5ZLN8	ATP-dependent RNA helicase DDX55 OS=Gallus gallus OX=9031 GN=DDX55 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24031	RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan